Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 SUMO2P5-201ENST00000506790 245 ntBASIC2.61□□□□□ -1.99
RNF139Q8WU17 RN7SKP31-201ENST00000516354 278 ntBASIC2.61□□□□□ -1.99
RNF139Q8WU17 AC025881.1-201ENST00000518851 512 ntBASIC2.61□□□□□ -1.99
RNF139Q8WU17 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RNF139Q8WU17 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.61□□□□□ -1.99
RNF139Q8WU17 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.61□□□□□ -1.99
RNF139Q8WU17 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.61□□□□□ -1.99
RNF139Q8WU17 AC002545.1-201ENST00000592511 181 ntBASIC2.61□□□□□ -1.99
RNF139Q8WU17 AC239868.4-201ENST00000608318 671 ntBASIC2.61□□□□□ -1.99
RNF139Q8WU17 AC025594.3-201ENST00000613068 790 ntBASIC2.61□□□□□ -1.99
RNF139Q8WU17 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.61□□□□□ -1.99
RNF139Q8WU17 IGHVIII-44-202ENST00000636235 289 ntBASIC2.61□□□□□ -1.99
RNF139Q8WU17 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
RNF139Q8WU17 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
RNF139Q8WU17 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
RNF139Q8WU17 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
RNF139Q8WU17 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RNF139Q8WU17 AL138713.1-201ENST00000624026 2130 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RNF139Q8WU17 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.6□□□□□ -1.99
RNF139Q8WU17 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF139Q8WU17 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RNF139Q8WU17 MIR449A-201ENST00000362113 91 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 RNU6-223P-201ENST00000362830 107 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 U3.12-201ENST00000364498 214 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 SNORA23-201ENST00000365128 182 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 Y_RNA.578-201ENST00000390903 88 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 RNU6-750P-201ENST00000390946 107 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 RNU6-1000P-201ENST00000391066 106 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 AL355143.1-201ENST00000407101 841 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 MTND4P3-201ENST00000417829 541 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 C1DP1-201ENST00000426049 402 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.6□□□□□ -1.99
RNF139Q8WU17 AC011753.1-201ENST00000451001 220 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 RPL18AP17-201ENST00000455326 198 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 AC104563.1-201ENST00000476147 376 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 MRPL42P6-201ENST00000486397 371 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 AC105252.1-201ENST00000503089 286 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 MTND3P3-201ENST00000505004 126 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 XKRY-201ENST00000510392 1100 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 AC006499.2-201ENST00000513470 337 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 MTND5P4-201ENST00000514978 288 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 SNORA31.15-201ENST00000516771 132 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 NRON-201ENST00000517270 370 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.6□□□□□ -1.99
RNF139Q8WU17 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.6□□□□□ -1.99
RNF139Q8WU17 BBIP1P1-201ENST00000602999 279 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 AP000787.2-201ENST00000604432 568 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 AL049779.4-201ENST00000604500 156 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 AC018645.2-201ENST00000609151 472 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 AC024257.5-201ENST00000612739 531 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 AL109620.1-201ENST00000618738 1197 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.6□□□□□ -1.99
RNF139Q8WU17 AL049777.1-201ENST00000622740 518 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 AC010297.1-201ENST00000623948 149 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.6□□□□□ -1.99
RNF139Q8WU17 MIR203B-201ENST00000636080 86 ntBASIC2.6□□□□□ -1.99
RNF139Q8WU17 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF139Q8WU17 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF139Q8WU17 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RNF139Q8WU17 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RNF139Q8WU17 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
RNF139Q8WU17 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RNF139Q8WU17 RNA5SP456-201ENST00000364002 114 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.59□□□□□ -1.99
RNF139Q8WU17 RNU6-298P-201ENST00000390888 96 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 CCNG1P1-201ENST00000406783 885 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 AC023141.4-201ENST00000412031 328 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 AL161449.1-201ENST00000414531 1199 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 USP9YP13-201ENST00000417797 480 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 ZYG11AP1-201ENST00000430329 837 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 RPL35AP22-201ENST00000436855 335 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RNF139Q8WU17 AL513328.1-201ENST00000446460 224 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 AC002381.1-201ENST00000447049 280 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 RNU7-136P-201ENST00000458819 69 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 AC097493.1-201ENST00000463958 372 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 AC133134.1-201ENST00000466800 359 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 AC021382.1-201ENST00000483523 359 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.59□□□□□ -1.99
RNF139Q8WU17 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.59□□□□□ -1.99
RNF139Q8WU17 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.59□□□□□ -1.99
RNF139Q8WU17 MIR4513-201ENST00000581077 86 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 AC093673.2-201ENST00000609674 331 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 OR1S1-201ENST00000624470 978 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 AC079228.1-201ENST00000624774 1049 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 AC243829.7-201ENST00000633081 225 ntBASIC2.59□□□□□ -1.99
RNF139Q8WU17 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RNF139Q8WU17 MTND4P27-201ENST00000450813 1354 ntBASIC2.59□□□□□ -2
RNF139Q8WU17 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
RNF139Q8WU17 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RNF139Q8WU17 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.58□□□□□ -2
RNF139Q8WU17 RNU1-52P-201ENST00000384190 164 ntBASIC2.58□□□□□ -2
RNF139Q8WU17 RNU6-754P-201ENST00000391166 107 ntBASIC2.58□□□□□ -2
RNF139Q8WU17 AL162578.1-201ENST00000406202 378 ntBASIC2.58□□□□□ -2
RNF139Q8WU17 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.58□□□□□ -2
RNF139Q8WU17 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.58□□□□□ -2
RNF139Q8WU17 HMGB1P9-201ENST00000429856 646 ntBASIC2.58□□□□□ -2
RNF139Q8WU17 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.58□□□□□ -2
RNF139Q8WU17 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms