Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AC004801.2-202ENST00000463559 283 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AC004924.1-201ENST00000480160 781 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AC093278.1-201ENST00000494700 600 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AC135721.1-201ENST00000497954 479 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 MTND2P33-201ENST00000506452 1031 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 HMGB3P15-201ENST00000507326 574 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 KLHL2P1-201ENST00000508691 521 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC01006Q8NI28 Y_RNA.672-201ENST00000516289 104 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC01006Q8NI28 SYF2P1-201ENST00000550658 413 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 SETP2-201ENST00000553886 926 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AL133153.1-201ENST00000557756 303 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC01006Q8NI28 FAM60BP-201ENST00000578364 658 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC01006Q8NI28 MIR3146-201ENST00000580367 79 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC01006Q8NI28 RPL12P50-201ENST00000603116 116 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AC090578.1-201ENST00000604955 591 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 RNU6-87P-201ENST00000607561 108 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AC007038.2-201ENST00000608095 740 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AC108479.2-201ENST00000617314 601 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
LINC01006Q8NI28 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AL136313.1-201ENST00000624804 202 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AC084035.1-201ENST00000634543 607 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC01006Q8NI28 AC093010.3-201ENST00000570269 15214 ntBASIC2.44□□□□□ -2.02
LINC01006Q8NI28 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01006Q8NI28 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC01006Q8NI28 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC01006Q8NI28 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 Y_RNA.41-201ENST00000362646 102 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 RNU5A-8P-201ENST00000364102 114 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 RNU6-637P-201ENST00000384050 107 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AP000567.1-201ENST00000406413 156 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 EEF1A1P41-201ENST00000414667 207 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 BX295541.1-201ENST00000417774 250 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 C1DP2-201ENST00000418167 426 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 RPS15AP12-201ENST00000419498 388 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 MTCO1P39-201ENST00000426148 480 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 MTCO3P5-201ENST00000433620 714 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AC009961.2-201ENST00000435771 251 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AC090774.1-201ENST00000435925 246 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AC104850.1-201ENST00000435940 476 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 TIMM9P1-201ENST00000436122 256 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AC004866.2-201ENST00000438285 481 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 MRPS31P2-201ENST00000451581 518 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 MLLT10P2-201ENST00000506434 249 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AC109464.2-201ENST00000510242 943 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 SNORA70.14-201ENST00000516205 110 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 MIR2276-201ENST00000516886 89 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 NDUFB9P3-201ENST00000521269 501 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 DEFB108D-201ENST00000527787 222 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 TGIF1P1-201ENST00000558095 802 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AC009063.1-201ENST00000563342 702 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 COX6CP3-201ENST00000580869 223 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AC079089.3-201ENST00000603094 673 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AC091805.2-201ENST00000603848 235 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AC006023.1-201ENST00000603944 259 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AP001330.4-201ENST00000604350 154 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AC121334.2-201ENST00000605387 271 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AL603758.1-201ENST00000618654 241 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AC002546.1-201ENST00000588041 2504 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 AP001148.1-201ENST00000624124 2359 ntBASIC2.43□□□□□ -2.02
LINC01006Q8NI28 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LINC01006Q8NI28 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 RNU1-39P-201ENST00000383897 165 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms