Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC079781.2-201ENST00000446424 169 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 PSPHP1-201ENST00000450062 261 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 RPL21P10-201ENST00000463521 490 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AC105914.1-201ENST00000511798 226 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 ARL2BPP6-201ENST00000512757 439 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 RN7SKP60-201ENST00000516985 239 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 RNU6-1220P-201ENST00000517126 108 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 RN7SKP289-201ENST00000517244 295 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 FAM92A1P1-201ENST00000528023 890 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 ZNF519P2-201ENST00000557032 169 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 MIR4425-201ENST00000580572 84 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AL670379.6-201ENST00000603753 252 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AL670379.11-201ENST00000604059 253 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AC008162.1-201ENST00000604718 254 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AL670379.1-201ENST00000604752 252 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AL670379.5-201ENST00000605253 252 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AL670379.12-201ENST00000605291 253 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AL670379.8-201ENST00000605353 252 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AL670379.7-201ENST00000605823 252 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AC007684.1-201ENST00000609671 477 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 RMST_8.1-201ENST00000610287 165 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AL355365.1-201ENST00000616480 294 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AP003355.3-201ENST00000623465 114 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AC048347.1-201ENST00000624621 427 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 MIR6863-201ENST00000636112 90 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AC068137.3-201ENST00000639191 341 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AC073869.6-201ENST00000640656 341 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 GABPAP-201ENST00000419271 1356 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 AL049781.1-201ENST00000623195 3585 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 RNU4-35P-201ENST00000362588 141 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 RNU1-39P-201ENST00000383897 165 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 RNU6-456P-201ENST00000384493 107 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 RNU4-55P-201ENST00000410731 137 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 MED13P1-201ENST00000428342 171 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 C8orf59P1-201ENST00000429930 303 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 RPL23AP83-201ENST00000434984 473 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 HMGB1P12-201ENST00000438594 598 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 TXNP1-201ENST00000441872 371 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 GAPDHP27-201ENST00000447427 1020 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 SNRPGP6-201ENST00000451124 220 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 MTND2P24-201ENST00000453434 806 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 RBMY2UP-201ENST00000453474 324 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 AC022364.2-201ENST00000457963 554 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 RPS20P20-201ENST00000460498 340 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 AC008155.2-201ENST00000464337 397 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 RPS4XP13-201ENST00000483219 789 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 AC026784.1-201ENST00000507986 352 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 NDUFB4P9-201ENST00000511646 388 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 SCARNA24.1-201ENST00000516465 137 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 RNU6-410P-201ENST00000517006 107 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 AL355836.1-201ENST00000555951 870 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 SUB1P2-201ENST00000556401 297 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 AC098848.2-201ENST00000588023 330 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 KLKP1-201ENST00000595979 403 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 AP003465.2-201ENST00000602571 373 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 AP002360.4-201ENST00000606980 481 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 AC009161.2-201ENST00000624626 138 ntBASIC3.26□□□□□ -1.89
BEST3Q8N1M1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
BEST3Q8N1M1 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms