Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 Y_RNA.680-201ENST00000516441 93 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.32□□□□□ -1.56
SIX5Q8N196 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.32□□□□□ -1.56
SIX5Q8N196 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SIX5Q8N196 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.32□□□□□ -1.56
SIX5Q8N196 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.32□□□□□ -1.56
SIX5Q8N196 MIR5096-201ENST00000583713 70 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-6P-201ENST00000606623 107 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 AC096772.1-201ENST00000609146 564 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 AC064801.1-201ENST00000612025 407 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIX5Q8N196 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.32□□□□□ -1.56
SIX5Q8N196 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.32□□□□□ -1.56
SIX5Q8N196 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SIX5Q8N196 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SIX5Q8N196 AC004925.1-201ENST00000624256 2706 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIX5Q8N196 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SIX5Q8N196 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
SIX5Q8N196 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SIX5Q8N196 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIX5Q8N196 DEFB108F-201ENST00000344638 222 ntBASIC5.31□□□□□ -1.56
SIX5Q8N196 Y_RNA.64-201ENST00000362845 102 ntBASIC5.31□□□□□ -1.56
SIX5Q8N196 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.31□□□□□ -1.56
SIX5Q8N196 Y_RNA.477-201ENST00000384352 108 ntBASIC5.31□□□□□ -1.56
SIX5Q8N196 RN7SKP114-201ENST00000410327 279 ntBASIC5.31□□□□□ -1.56
SIX5Q8N196 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.31□□□□□ -1.56
SIX5Q8N196 RPL17P36-201ENST00000420302 549 ntBASIC5.31□□□□□ -1.56
SIX5Q8N196 EIF4EP2-201ENST00000422816 654 ntBASIC5.31□□□□□ -1.56
SIX5Q8N196 snoU13.1-201ENST00000459157 104 ntBASIC5.31□□□□□ -1.56
SIX5Q8N196 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.31□□□□□ -1.56
SIX5Q8N196 AP004371.1-201ENST00000525240 214 ntBASIC5.31□□□□□ -1.56
SIX5Q8N196 HNRNPCP4-201ENST00000571636 900 ntBASIC5.31□□□□□ -1.56
SIX5Q8N196 AC136624.4-201ENST00000573044 370 ntBASIC5.31□□□□□ -1.56
SIX5Q8N196 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.31□□□□□ -1.56
SIX5Q8N196 AC105254.2-201ENST00000603636 436 ntBASIC5.31□□□□□ -1.56
SIX5Q8N196 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.31□□□□□ -1.56
SIX5Q8N196 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.31□□□□□ -1.56
SIX5Q8N196 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SIX5Q8N196 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIX5Q8N196 MTND5P9-201ENST00000503854 1755 ntBASIC5.31□□□□□ -1.56
SIX5Q8N196 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
SIX5Q8N196 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIX5Q8N196 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.31□□□□□ -1.56
SIX5Q8N196 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SIX5Q8N196 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIX5Q8N196 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIX5Q8N196 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SIX5Q8N196 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SIX5Q8N196 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
SIX5Q8N196 Y_RNA.471-201ENST00000384312 102 ntBASIC5.3□□□□□ -1.56
SIX5Q8N196 RNA5SP332-201ENST00000391063 115 ntBASIC5.3□□□□□ -1.56
SIX5Q8N196 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.3□□□□□ -1.56
SIX5Q8N196 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
SIX5Q8N196 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.3□□□□□ -1.56
SIX5Q8N196 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.3□□□□□ -1.56
SIX5Q8N196 AC087650.1-201ENST00000431445 468 ntBASIC5.3□□□□□ -1.56
SIX5Q8N196 SUMO1P3-201ENST00000439961 304 ntBASIC5.3□□□□□ -1.56
SIX5Q8N196 FCF1P4-201ENST00000448326 183 ntBASIC5.3□□□□□ -1.56
SIX5Q8N196 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.3□□□□□ -1.56
SIX5Q8N196 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.3□□□□□ -1.56
SIX5Q8N196 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.3□□□□□ -1.56
SIX5Q8N196 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.3□□□□□ -1.56
SIX5Q8N196 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.3□□□□□ -1.56
SIX5Q8N196 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.3□□□□□ -1.56
SIX5Q8N196 RNU6-911P-201ENST00000516523 104 ntBASIC5.3□□□□□ -1.56
SIX5Q8N196 AC091144.1-201ENST00000519573 138 ntBASIC5.3□□□□□ -1.56
SIX5Q8N196 AC084851.1-201ENST00000529105 249 ntBASIC5.3□□□□□ -1.56
SIX5Q8N196 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SIX5Q8N196 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.3□□□□□ -1.56
SIX5Q8N196 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.3□□□□□ -1.56
SIX5Q8N196 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.3□□□□□ -1.56
SIX5Q8N196 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SIX5Q8N196 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SIX5Q8N196 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIX5Q8N196 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIX5Q8N196 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SIX5Q8N196 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIX5Q8N196 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SIX5Q8N196 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.3□□□□□ -1.56
SIX5Q8N196 DDX18P3-201ENST00000404856 2007 ntBASIC5.3□□□□□ -1.56
SIX5Q8N196 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SIX5Q8N196 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SIX5Q8N196 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SIX5Q8N196 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
SIX5Q8N196 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.29□□□□□ -1.56
SIX5Q8N196 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SIX5Q8N196 MAPK10-263ENST00000641052 4307 ntBASIC5.29□□□□□ -1.56
SIX5Q8N196 RNA5SP90-201ENST00000364801 99 ntBASIC5.29□□□□□ -1.56
SIX5Q8N196 RNU6-827P-201ENST00000365553 106 ntBASIC5.29□□□□□ -1.56
SIX5Q8N196 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SIX5Q8N196 SNORA66-201ENST00000384792 133 ntBASIC5.29□□□□□ -1.56
SIX5Q8N196 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SIX5Q8N196 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.29□□□□□ -1.56
SIX5Q8N196 AL159987.2-201ENST00000432754 307 ntBASIC5.29□□□□□ -1.56
SIX5Q8N196 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.29□□□□□ -1.56
SIX5Q8N196 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.29□□□□□ -1.56
SIX5Q8N196 RPL7P5-201ENST00000471472 736 ntBASIC5.29□□□□□ -1.56
SIX5Q8N196 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms