Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 AC074050.1-201ENST00000563247 211 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 UBE2L4-201ENST00000587688 464 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 AL596327.1-201ENST00000603629 213 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 AC013476.2-201ENST00000614456 459 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 AL158801.5-201ENST00000623123 465 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 SNORD62.1-201ENST00000362541 86 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 RNU6-853P-201ENST00000364306 107 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 RNU6-741P-201ENST00000383889 107 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 RNU6-1072P-201ENST00000384703 107 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 RNU6-443P-201ENST00000384780 107 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 MIR128-1-201ENST00000384921 82 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 U3.20-201ENST00000390909 217 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 RNA5SP354-201ENST00000391247 136 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 SNORA11.1-201ENST00000408133 129 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 RN7SKP140-201ENST00000411196 284 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AC092047.1-201ENST00000424997 240 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 CR769767.1-201ENST00000436337 346 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 UBE2V1P13-201ENST00000436983 439 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AL117351.1-201ENST00000438864 766 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 Z82210.1-201ENST00000440037 231 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AC004854.1-201ENST00000440356 349 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 MTND3P1-201ENST00000441336 220 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 PIGFP3-201ENST00000441918 722 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AC009961.3-201ENST00000449832 765 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AC135721.1-201ENST00000497954 479 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AC104090.1-201ENST00000506341 1171 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 RNA5SP471-201ENST00000516971 106 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AC243972.3-201ENST00000539655 198 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 GLYCAM1-201ENST00000546596 285 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AL645944.1-201ENST00000603857 493 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 AL161756.2-201ENST00000604597 246 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.47□□□□□ -2.01
NUDCD3Q8IVD9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.46□□□□□ -2.01
NUDCD3Q8IVD9 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 RNA5SP456-201ENST00000364002 114 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 AL590084.2-201ENST00000401481 382 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 MIR320C1-201ENST00000408566 88 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 MTND1P21-201ENST00000412991 285 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 ELOCP9-201ENST00000418624 239 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 TXNL1P1-201ENST00000429528 554 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 AL049734.2-201ENST00000441066 616 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 FGF7P5-201ENST00000441829 291 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 RPS24P13-201ENST00000442520 397 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 AP000542.1-201ENST00000448473 371 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 AP1S2P1-201ENST00000457344 379 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 RPP40P2-201ENST00000603596 712 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 AL357094.1-201ENST00000603845 844 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 AL158042.1-201ENST00000605338 460 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 AC112220.3-201ENST00000605502 502 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 TUG1_2.1-201ENST00000614234 87 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 AC010133.1-201ENST00000615809 842 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 AL136981.2-201ENST00000617319 734 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 AP001002.2-201ENST00000625137 386 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 CR848007.1-201ENST00000442354 1699 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 AC009902.3-201ENST00000606235 2172 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 PABPC1P9-201ENST00000426076 1612 ntBASIC2.46□□□□□ -2.02
NUDCD3Q8IVD9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms