Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 RNU6-356P-201ENST00000384140 107 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 SNORA36C-201ENST00000384289 132 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 Y_RNA.483-201ENST00000384380 101 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 AL513475.1-201ENST00000406602 315 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 ELOCP20-201ENST00000422460 345 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 EIF4EP2-201ENST00000422816 654 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 CKS1BP6-201ENST00000424932 240 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 OR2AH1P-201ENST00000425717 928 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 AL132765.1-201ENST00000434165 553 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 RPS17P8-201ENST00000434525 335 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 USP9YP7-201ENST00000436723 430 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 RPS3AP46-201ENST00000448352 682 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 USP9YP32-201ENST00000452432 430 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 RNA5SP103-201ENST00000459503 118 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 RNU6-1037P-201ENST00000459571 107 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 Y_RNA.680-201ENST00000516441 93 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 RNU6-143P-201ENST00000516942 93 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 RNU6-1315P-201ENST00000517187 99 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 TRAV32-201ENST00000553993 340 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 AC004584.2-201ENST00000570407 410 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 MIR4646-201ENST00000580775 63 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 MIR3128-201ENST00000581957 66 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 RAC1P9-201ENST00000604990 392 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 AL159153.1-201ENST00000619688 317 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 AC130454.1-201ENST00000622948 401 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 AC083843.3-201ENST00000623679 2186 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 SAMMSON-226ENST00000642089 1582 ntBASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
UBE3DQ7Z6J8 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
UBE3DQ7Z6J8 TLK1P1-201ENST00000456760 2440 ntBASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 RNA5SP191-201ENST00000362585 102 ntBASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 Y_RNA.60-201ENST00000362831 98 ntBASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 Y_RNA.222-201ENST00000364264 102 ntBASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 AC007098.1-201ENST00000420122 367 ntBASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 AL138785.1-201ENST00000425821 331 ntBASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 MTATP6P4-201ENST00000427725 675 ntBASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 CEACAMP6-201ENST00000452007 574 ntBASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 AURKAPS2-201ENST00000454983 333 ntBASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 MIR892C-201ENST00000516410 77 ntBASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 FKBP1BP1-201ENST00000553366 325 ntBASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 MIR1273C-201ENST00000578669 77 ntBASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 AC022726.1-201ENST00000587475 207 ntBASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 RPS29P30-201ENST00000600975 111 ntBASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 AC211433.2-201ENST00000608433 387 ntBASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 SNORD39.4-201ENST00000620099 78 ntBASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 ZNF299P-201ENST00000406845 1804 ntBASIC4.58□□□□□ -1.68
UBE3DQ7Z6J8 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
UBE3DQ7Z6J8 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.57□□□□□ -1.68
UBE3DQ7Z6J8 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UBE3DQ7Z6J8 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
UBE3DQ7Z6J8 AC022893.2-201ENST00000564832 3296 ntBASIC4.57□□□□□ -1.68
UBE3DQ7Z6J8 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UBE3DQ7Z6J8 U8.8-201ENST00000365399 135 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 190.2 ms