Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MTND1P35-201ENST00000526739 508 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SHFQ7M4L6 OR5BN1P-201ENST00000532955 829 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 CYCSP30-201ENST00000546447 172 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 AL670379.6-201ENST00000603753 252 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 AL670379.11-201ENST00000604059 253 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 AC008162.1-201ENST00000604718 254 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 AL670379.1-201ENST00000604752 252 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 AL670379.5-201ENST00000605253 252 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 AL670379.12-201ENST00000605291 253 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 AL670379.8-201ENST00000605353 252 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 AL670379.7-201ENST00000605823 252 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 AL589994.2-201ENST00000621124 579 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 C2orf27A-204ENST00000623058 969 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 MIR6830-201ENST00000636015 70 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 AL732372.2-225ENST00000642124 456 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHFQ7M4L6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHFQ7M4L6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SHFQ7M4L6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHFQ7M4L6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHFQ7M4L6 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHFQ7M4L6 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHFQ7M4L6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHFQ7M4L6 DEFB108F-201ENST00000344638 222 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 Y_RNA.38-201ENST00000362617 102 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 RNU5A-1-201ENST00000362698 116 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 SNORA51.2-201ENST00000364595 132 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 SNORA24.1-201ENST00000384401 135 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHFQ7M4L6 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHFQ7M4L6 USP9YP6-201ENST00000413550 854 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 OR51A5P-201ENST00000415429 942 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 AL158071.1-201ENST00000430315 461 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 VDAC1P3-201ENST00000434069 851 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 DDX3P2-201ENST00000446138 111 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 CACYBPP2-201ENST00000453625 678 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 RNU7-63P-201ENST00000459054 62 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 AC006512.1-201ENST00000468816 291 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 AC084357.1-201ENST00000473404 255 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 AC233702.1-201ENST00000482905 502 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 AC069439.1-201ENST00000494739 167 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 AP006587.4-201ENST00000526053 529 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 OR5D17P-201ENST00000531492 978 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 OR5B19P-201ENST00000531766 928 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 AP004242.1-201ENST00000533701 349 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHFQ7M4L6 AC068135.2-201ENST00000569293 1028 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 AC008752.3-201ENST00000588113 712 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 DPPA3P3-201ENST00000603842 430 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 AC010591.1-201ENST00000603941 649 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 AC007619.2-201ENST00000605743 379 ntBASIC3.28□□□□□ -1.88
SHFQ7M4L6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHFQ7M4L6 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHFQ7M4L6 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHFQ7M4L6 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.28□□□□□ -1.88
SHFQ7M4L6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHFQ7M4L6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHFQ7M4L6 MFSD8-236ENST00000641509 4050 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHFQ7M4L6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHFQ7M4L6 AC006020.1-201ENST00000420179 1854 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHFQ7M4L6 RNA5SP42-201ENST00000364278 115 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 SNORA62.1-201ENST00000364287 154 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 Y_RNA.295-201ENST00000364918 102 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHFQ7M4L6 RNU6-946P-201ENST00000383878 107 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 SNORA69-201ENST00000383895 132 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 MTHFD2P2-201ENST00000407725 247 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 RNA5SP317-201ENST00000410176 116 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms