Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 Y_RNA.419-201ENST00000384041 102 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 Y_RNA.474-201ENST00000384341 102 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AL035423.1-201ENST00000420331 213 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AL645937.1-202ENST00000421799 937 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AC127537.2-201ENST00000439258 465 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 MRPS31P2-201ENST00000451581 518 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 snoU13.8-201ENST00000458890 104 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 HMGN2P26-201ENST00000463169 339 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AC103851.1-201ENST00000506833 274 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 OR4R1P-201ENST00000529879 463 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AC092470.1-201ENST00000546187 132 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AC011611.1-201ENST00000552179 197 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 SCOCP1-201ENST00000554676 349 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AL355375.2-201ENST00000574825 175 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 KC877982.1-201ENST00000602313 470 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AC068790.3-201ENST00000602988 553 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AC010680.4-201ENST00000605334 543 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AL138713.1-201ENST00000624026 2130 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 AL021368.2-201ENST00000606125 5352 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.51□□□□□ -1.85
ZNF549Q6P9A3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 OR1S2-201ENST00000302592 978 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 Y_RNA.184-201ENST00000363884 108 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 RNY1P12-201ENST00000364251 105 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 RNU6-996P-201ENST00000365438 107 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 RNU4-20P-201ENST00000365601 151 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 RNU6-692P-201ENST00000384496 107 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 MIR514A2-201ENST00000385131 88 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 MIR514A3-201ENST00000385132 88 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 MIR1302-11-201ENST00000408051 138 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 MIR1302-9-201ENST00000408365 138 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 MIR1302-10-201ENST00000408734 138 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 MIR1183-201ENST00000408856 89 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 CYCSP19-201ENST00000411715 316 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 RPL35AP12-201ENST00000425362 338 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 MRPS18BP2-201ENST00000434310 759 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 DDX3P2-201ENST00000446138 111 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 RPL7P12-201ENST00000446719 750 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 AL359073.1-201ENST00000448036 403 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 RPS3AP46-201ENST00000448352 682 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 SNORD121B-201ENST00000458838 81 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 GMFBP1-201ENST00000467831 427 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 RN7SL594P-201ENST00000470590 287 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 AL163973.1-201ENST00000484753 577 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 MIR4425-201ENST00000580572 84 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 AC004853.1-201ENST00000604902 698 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 AC113194.1-201ENST00000606037 500 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 AL121992.2-201ENST00000606262 256 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 MIR1302-2-201ENST00000607096 138 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 AC105429.2-201ENST00000610567 517 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 AC245517.5-201ENST00000611529 162 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 PART1_1.1-201ENST00000611761 217 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 U4.6-201ENST00000621618 127 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 AC112200.1-201ENST00000625015 234 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 TPTEP1-208ENST00000636884 213 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 OR4G1P-203ENST00000641984 1631 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 MTND4P35-201ENST00000604257 1375 ntBASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
ZNF549Q6P9A3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ZNF549Q6P9A3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.49□□□□□ -1.85
ZNF549Q6P9A3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ZNF549Q6P9A3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ZNF549Q6P9A3 RNY3P13-201ENST00000365542 102 ntBASIC3.49□□□□□ -1.85
ZNF549Q6P9A3 MIR184-201ENST00000384962 84 ntBASIC3.49□□□□□ -1.85
ZNF549Q6P9A3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms