Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 RPL23P2-201ENST00000320371 421 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 U8.7-201ENST00000364940 136 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 RNU1-136P-201ENST00000384181 164 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 RNU6-178P-201ENST00000384631 104 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 RNU6-376P-201ENST00000384731 106 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 RPL31P2-201ENST00000413849 377 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 AL117339.3-201ENST00000418733 162 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 WARS2P1-201ENST00000429678 537 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 HMGB1P27-201ENST00000431429 603 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 AL591623.2-201ENST00000449978 222 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 snoU13.30-201ENST00000458951 104 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 RPL26P26-201ENST00000480251 434 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 RPS27AP13-201ENST00000498403 237 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 MRPS33P2-201ENST00000507850 322 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 HMGB3P16-201ENST00000508037 287 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 FCF1P8-201ENST00000510322 597 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 RNU6-941P-201ENST00000516346 108 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 IGLVIV-53-201ENST00000520107 367 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 AP005403.1-201ENST00000579720 229 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 MIR6730-201ENST00000622213 67 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 AP000756.2-201ENST00000624168 2567 ntBASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RNFT1Q5M7Z0 SMG1P6-201ENST00000532337 2930 ntBASIC4.96□□□□□ -1.61
RNFT1Q5M7Z0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
RNFT1Q5M7Z0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
RNFT1Q5M7Z0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 MIR133A2-201ENST00000347538 102 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-222P-201ENST00000362438 107 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-37P-201ENST00000362692 107 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 U8.4-201ENST00000363626 134 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-11P-201ENST00000364234 107 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 Y_RNA.230-201ENST00000364348 109 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-7-201ENST00000364784 107 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU4-9P-201ENST00000364951 139 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-8-201ENST00000365467 107 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU4-17P-201ENST00000365598 141 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-25P-201ENST00000383873 107 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-1-201ENST00000383898 107 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-36P-201ENST00000384172 107 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-4P-201ENST00000384205 107 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-5P-201ENST00000384238 107 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-3P-201ENST00000384314 107 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-16P-201ENST00000384385 107 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-15P-201ENST00000384534 107 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-2-201ENST00000384627 107 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-29P-201ENST00000384637 107 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-9-201ENST00000384776 107 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 MIR937-201ENST00000401271 86 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 SNORD12B-201ENST00000410433 91 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RPL23AP27-201ENST00000415161 451 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RN7SL826P-201ENST00000479724 288 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RPS15AP34-201ENST00000487776 387 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RN7SL447P-201ENST00000494711 245 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNA5SP228-201ENST00000516232 133 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 DEFB131C-201ENST00000528817 165 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 AC123786.2-201ENST00000603459 275 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-6P-201ENST00000606623 107 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 AC126915.2-201ENST00000610957 190 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RPSAP73-201ENST00000614820 330 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 snoU18.1-201ENST00000629629 71 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 AC104964.3-201ENST00000606115 2860 ntBASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms