Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 NDUFA8P1-201ENST00000605525 367 ntBASIC3.81□□□□□ -1.8
DDR1Q08345 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.81□□□□□ -1.8
DDR1Q08345 Z99129.1-201ENST00000612510 255 ntBASIC3.81□□□□□ -1.8
DDR1Q08345 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
DDR1Q08345 AC091925.2-201ENST00000625059 256 ntBASIC3.81□□□□□ -1.8
DDR1Q08345 AC005183.1-201ENST00000603687 1979 ntBASIC3.81□□□□□ -1.8
DDR1Q08345 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
DDR1Q08345 MTND5P27-201ENST00000428871 1720 ntBASIC3.81□□□□□ -1.8
DDR1Q08345 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
DDR1Q08345 AC073544.1-201ENST00000600110 1595 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
DDR1Q08345 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
DDR1Q08345 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
DDR1Q08345 RNU6-952P-201ENST00000391164 108 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 RNA5SP31-201ENST00000411144 127 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.8□□□□□ -1.8
DDR1Q08345 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.8□□□□□ -1.8
DDR1Q08345 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.8□□□□□ -1.8
DDR1Q08345 MTND5P14-201ENST00000441481 1267 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.8□□□□□ -1.8
DDR1Q08345 AC125238.1-201ENST00000448842 249 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 HMGB1P15-201ENST00000453854 435 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 HMGB1P25-201ENST00000468402 607 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 AC021205.2-201ENST00000480069 347 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 AC090453.1-201ENST00000495560 436 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 AC096751.1-202ENST00000502691 1067 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.8□□□□□ -1.8
DDR1Q08345 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.8□□□□□ -1.8
DDR1Q08345 OR5G4P-201ENST00000525251 760 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.8□□□□□ -1.8
DDR1Q08345 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.8□□□□□ -1.8
DDR1Q08345 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.8□□□□□ -1.8
DDR1Q08345 AC091544.4-201ENST00000555268 342 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.8□□□□□ -1.8
DDR1Q08345 MIR548AB-201ENST00000584917 84 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 AC015871.2-201ENST00000603605 948 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 AC097468.3-201ENST00000607956 456 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 AC017083.3-201ENST00000609955 700 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 AC104010.1-201ENST00000616889 150 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 U6.42-201ENST00000618440 107 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 AC019226.1-201ENST00000625666 515 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.8□□□□□ -1.8
DDR1Q08345 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
DDR1Q08345 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
DDR1Q08345 AC006378.2-201ENST00000623178 2476 ntBASIC3.8□□□□□ -1.8
DDR1Q08345 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.8□□□□□ -1.8
DDR1Q08345 TEX21P-201ENST00000447107 1476 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
DDR1Q08345 AC002546.1-201ENST00000588041 2504 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DDR1Q08345 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DDR1Q08345 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
DDR1Q08345 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DDR1Q08345 RNA5SP295-201ENST00000362655 121 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 RNU6-343P-201ENST00000364709 104 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 XGY1-201ENST00000381172 446 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 RPL7P25-201ENST00000404151 721 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 RNU2-66P-201ENST00000410650 161 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 RNU6-248P-201ENST00000410720 107 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 FCF1P9-201ENST00000412546 282 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.79□□□□□ -1.8
DDR1Q08345 AC007390.1-201ENST00000415722 356 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 TOMM22P1-201ENST00000418578 312 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 RPL21P32-201ENST00000419877 477 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.79□□□□□ -1.8
DDR1Q08345 AL445669.1-201ENST00000426743 755 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 AC010975.2-201ENST00000427781 588 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.79□□□□□ -1.8
DDR1Q08345 RSU1P2-202ENST00000437884 485 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 GDI2P2-201ENST00000445131 608 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.79□□□□□ -1.8
DDR1Q08345 SNORD42A-201ENST00000459584 64 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 MLLT10P2-201ENST00000506434 249 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 POU5F1P7-201ENST00000508759 541 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 CDC42P4-201ENST00000510507 563 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 AP004247.1-201ENST00000531556 1289 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.79□□□□□ -1.8
DDR1Q08345 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.79□□□□□ -1.8
DDR1Q08345 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.79□□□□□ -1.8
DDR1Q08345 AC138761.3-201ENST00000579993 334 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 MIR544B-201ENST00000582372 78 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 AC005771.1-201ENST00000585581 349 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 XIAPP1-201ENST00000603162 600 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 LARP7P1-201ENST00000605576 316 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 AC090186.1-201ENST00000605991 572 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 AC107294.3-201ENST00000609211 526 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 AL445264.1-201ENST00000621719 171 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 AL360181.4-201ENST00000621752 134 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 AC093648.1-201ENST00000623546 606 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 SNORA50A-202ENST00000629536 136 ntBASIC3.79□□□□□ -1.8
DDR1Q08345 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
DDR1Q08345 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
DDR1Q08345 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.79□□□□□ -1.8
DDR1Q08345 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.78□□□□□ -1.8
DDR1Q08345 AP001148.1-201ENST00000624124 2359 ntBASIC3.78□□□□□ -1.8
DDR1Q08345 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DDR1Q08345 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
DDR1Q08345 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms