Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN7AQ01118 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN7AQ01118 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN7AQ01118 Z77249.1-201ENST00000444622 1175 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN7AQ01118 AC096992.1-201ENST00000459808 709 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SCN7AQ01118 AL359273.1-201ENST00000510918 627 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN7AQ01118 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN7AQ01118 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.48□□□□□ -2.17
SCN7AQ01118 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
SCN7AQ01118 AC011712.1-201ENST00000588959 234 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 AC245884.12-201ENST00000615364 59 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 RNU6-666P-201ENST00000363499 107 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 MIR222-201ENST00000384992 110 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 RNU4-72P-201ENST00000410754 173 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SCN7AQ01118 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN7AQ01118 RPL7P30-201ENST00000420888 709 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.48□□□□□ -2.17
SCN7AQ01118 MTCO1P48-201ENST00000448024 1096 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN7AQ01118 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.48□□□□□ -2.17
SCN7AQ01118 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC1.48□□□□□ -2.17
SCN7AQ01118 AC004062.1-201ENST00000509926 645 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN7AQ01118 FABP5P5-201ENST00000515537 406 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 AC022634.1-201ENST00000520765 532 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 AC009127.3-201ENST00000570531 403 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN7AQ01118 AL391646.1-201ENST00000603860 190 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 AC106028.5-201ENST00000610332 395 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 AC011472.4-201ENST00000615848 491 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 AC006338.1-201ENST00000618453 749 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 AC015726.3-201ENST00000624501 418 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 AC110079.1-202ENST00000635213 138 ntBASIC1.48□□□□□ -2.17
SCN7AQ01118 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SCN7AQ01118 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.47□□□□□ -2.17
SCN7AQ01118 MIR1285-1-201ENST00000408593 84 ntBASIC1.47□□□□□ -2.17
SCN7AQ01118 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.47□□□□□ -2.17
SCN7AQ01118 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.47□□□□□ -2.17
SCN7AQ01118 AL139109.1-201ENST00000455491 297 ntBASIC1.47□□□□□ -2.17
SCN7AQ01118 snoU13.3-201ENST00000459441 104 ntBASIC1.47□□□□□ -2.17
SCN7AQ01118 AC087343.1-201ENST00000477341 475 ntBASIC1.47□□□□□ -2.17
SCN7AQ01118 HMGB3P17-201ENST00000504195 649 ntBASIC1.47□□□□□ -2.17
SCN7AQ01118 AC093767.1-201ENST00000504523 156 ntBASIC1.47□□□□□ -2.17
SCN7AQ01118 HMGB1P22-201ENST00000505315 124 ntBASIC1.47□□□□□ -2.17
SCN7AQ01118 SNORA31.8-201ENST00000516327 108 ntBASIC1.47□□□□□ -2.17
SCN7AQ01118 MIR514B-201ENST00000516774 80 ntBASIC1.47□□□□□ -2.17
SCN7AQ01118 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.47□□□□□ -2.17
SCN7AQ01118 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.47□□□□□ -2.17
SCN7AQ01118 AC245036.5-201ENST00000596330 847 ntBASIC1.47□□□□□ -2.17
SCN7AQ01118 AC020658.4-201ENST00000613987 684 ntBASIC1.47□□□□□ -2.17
SCN7AQ01118 AC011330.2-201ENST00000621680 635 ntBASIC1.47□□□□□ -2.17
SCN7AQ01118 AC006963.1-201ENST00000624003 1052 ntBASIC1.47□□□□□ -2.17
SCN7AQ01118 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.46□□□□□ -2.18
SCN7AQ01118 RNA5SP38-201ENST00000410750 119 ntBASIC1.46□□□□□ -2.18
SCN7AQ01118 AL078601.1-201ENST00000444542 271 ntBASIC1.46□□□□□ -2.18
SCN7AQ01118 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.46□□□□□ -2.18
SCN7AQ01118 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.46□□□□□ -2.18
SCN7AQ01118 SNRPFP3-201ENST00000457792 225 ntBASIC1.46□□□□□ -2.18
SCN7AQ01118 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
SCN7AQ01118 RNU2-44P-201ENST00000516795 194 ntBASIC1.46□□□□□ -2.18
SCN7AQ01118 CYCSP26-201ENST00000534107 320 ntBASIC1.46□□□□□ -2.18
SCN7AQ01118 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SCN7AQ01118 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SCN7AQ01118 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.46□□□□□ -2.18
SCN7AQ01118 AC016727.2-201ENST00000603988 621 ntBASIC1.46□□□□□ -2.18
SCN7AQ01118 AC073592.7-201ENST00000623659 507 ntBASIC1.46□□□□□ -2.18
SCN7AQ01118 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SCN7AQ01118 MTND4P27-201ENST00000450813 1354 ntBASIC1.46□□□□□ -2.18
SCN7AQ01118 AC007342.9-201ENST00000623877 1385 ntBASIC1.46□□□□□ -2.18
SCN7AQ01118 RNU2-21P-201ENST00000410368 188 ntBASIC1.45□□□□□ -2.18
SCN7AQ01118 TPMTP3-201ENST00000411928 735 ntBASIC1.45□□□□□ -2.18
SCN7AQ01118 RPS20P15-201ENST00000412792 311 ntBASIC1.45□□□□□ -2.18
SCN7AQ01118 ZNF90P2-204ENST00000419323 1075 ntBASIC1.45□□□□□ -2.18
SCN7AQ01118 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.45□□□□□ -2.18
SCN7AQ01118 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
SCN7AQ01118 MTCYBP34-201ENST00000439552 670 ntBASIC1.45□□□□□ -2.18
SCN7AQ01118 AL360221.1-201ENST00000445989 335 ntBASIC1.45□□□□□ -2.18
SCN7AQ01118 SUMO2P6-201ENST00000505273 288 ntBASIC1.45□□□□□ -2.18
SCN7AQ01118 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SCN7AQ01118 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.45□□□□□ -2.18
SCN7AQ01118 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN7AQ01118 AC024619.4-201ENST00000580924 316 ntBASIC1.45□□□□□ -2.18
SCN7AQ01118 AL136363.1-201ENST00000605349 337 ntBASIC1.45□□□□□ -2.18
SCN7AQ01118 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.45□□□□□ -2.18
SCN7AQ01118 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SCN7AQ01118 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SCN7AQ01118 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SCN7AQ01118 SNORA1.3-201ENST00000384676 136 ntBASIC1.45□□□□□ -2.18
SCN7AQ01118 OR51AB1P-201ENST00000429046 620 ntBASIC1.45□□□□□ -2.18
SCN7AQ01118 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN7AQ01118 AC010285.1-201ENST00000470580 392 ntBASIC1.45□□□□□ -2.18
SCN7AQ01118 RN7SKP265-201ENST00000516448 223 ntBASIC1.45□□□□□ -2.18
SCN7AQ01118 AC087272.1-201ENST00000523624 533 ntBASIC1.45□□□□□ -2.18
SCN7AQ01118 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.45□□□□□ -2.18
SCN7AQ01118 AC009090.3-201ENST00000616553 565 ntBASIC1.45□□□□□ -2.18
SCN7AQ01118 MFSD8-213ENST00000641134 1327 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms