Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC080013.4-201ENST00000607624 649 ntBASIC1.77□□□□□ -2.13
H3F3AP84243 DUXAP9-208ENST00000622815 614 ntBASIC1.77□□□□□ -2.13
H3F3AP84243 KPNA2P1-201ENST00000458289 1591 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
H3F3AP84243 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
H3F3AP84243 RNU6-253P-201ENST00000384730 105 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 MIR218-1-201ENST00000384999 110 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 MIR514A1-201ENST00000385133 98 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 ZNF736P10Y-201ENST00000403990 1110 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 RNU4-26P-201ENST00000410270 107 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 RNA5SP270-201ENST00000411361 118 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.76□□□□□ -2.13
H3F3AP84243 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.76□□□□□ -2.13
H3F3AP84243 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
H3F3AP84243 RPS15AP5-201ENST00000436276 388 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 AL451074.3-201ENST00000437709 472 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 AC007000.2-201ENST00000442564 487 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 AL050341.1-201ENST00000447743 313 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 MTCO1P48-201ENST00000448024 1096 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 AP1S2P1-201ENST00000457344 379 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
H3F3AP84243 AL121769.1-201ENST00000469473 401 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 MTCO2P9-201ENST00000503214 694 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 AC091917.2-201ENST00000505002 744 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 AC022447.1-201ENST00000515358 464 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.76□□□□□ -2.13
H3F3AP84243 AP003066.2-201ENST00000529375 555 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 AC010186.2-204ENST00000537668 439 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.76□□□□□ -2.13
H3F3AP84243 AC093519.1-201ENST00000566109 298 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 AC008749.1-201ENST00000597650 306 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 AC092954.1-201ENST00000609121 445 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 AP001521.1-201ENST00000609150 300 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 AL162373.1-201ENST00000620433 407 ntBASIC1.76□□□□□ -2.13
H3F3AP84243 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.76□□□□□ -2.13
H3F3AP84243 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
H3F3AP84243 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
H3F3AP84243 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.76□□□□□ -2.13
H3F3AP84243 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
H3F3AP84243 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
H3F3AP84243 AC005832.2-201ENST00000538921 1430 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 AC004520.1-201ENST00000608362 1413 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.75□□□□□ -2.13
H3F3AP84243 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.75□□□□□ -2.13
H3F3AP84243 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
H3F3AP84243 RNU6-582P-201ENST00000362989 107 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
H3F3AP84243 RNU6-76P-201ENST00000384060 104 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 SNORD116-23-201ENST00000384645 92 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 TMSB4XP8-201ENST00000402089 135 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 HMGB1P17-201ENST00000403495 628 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 TMSB4XP6-201ENST00000415187 135 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 HMGB1P49-201ENST00000418882 569 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.75□□□□□ -2.13
H3F3AP84243 AC018630.2-202ENST00000422992 927 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 TMSB4XP1-201ENST00000424567 135 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.75□□□□□ -2.13
H3F3AP84243 HMGB1P9-201ENST00000429856 646 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.75□□□□□ -2.13
H3F3AP84243 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.75□□□□□ -2.13
H3F3AP84243 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.75□□□□□ -2.13
H3F3AP84243 AC068781.1-201ENST00000488231 618 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 RN7SL274P-201ENST00000492268 272 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 AC092436.1-201ENST00000506450 503 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 SCARNA15.2-201ENST00000516409 127 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 RNU6-885P-201ENST00000516607 104 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.75□□□□□ -2.13
H3F3AP84243 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
H3F3AP84243 MTCO1P40-201ENST00000574371 625 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.75□□□□□ -2.13
H3F3AP84243 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.75□□□□□ -2.13
H3F3AP84243 AP001486.3-201ENST00000615334 372 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 MIR6130-201ENST00000619419 109 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 AC073592.7-201ENST00000623659 507 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 AC132825.7-201ENST00000638744 335 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
H3F3AP84243 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
H3F3AP84243 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
H3F3AP84243 AC004944.1-201ENST00000517807 3059 ntBASIC1.75□□□□□ -2.13
H3F3AP84243 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
H3F3AP84243 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
H3F3AP84243 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
H3F3AP84243 SNORD114-1-201ENST00000362705 72 ntBASIC1.74□□□□□ -2.13
H3F3AP84243 RNA5SP125-201ENST00000364843 120 ntBASIC1.74□□□□□ -2.13
H3F3AP84243 MIR676-201ENST00000390702 67 ntBASIC1.74□□□□□ -2.13
H3F3AP84243 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.74□□□□□ -2.13
H3F3AP84243 AC004383.1-201ENST00000438135 289 ntBASIC1.74□□□□□ -2.13
H3F3AP84243 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.74□□□□□ -2.13
H3F3AP84243 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.74□□□□□ -2.13
H3F3AP84243 MTAPP1-201ENST00000489154 819 ntBASIC1.74□□□□□ -2.13
H3F3AP84243 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
H3F3AP84243 RPL38P4-201ENST00000502376 214 ntBASIC1.74□□□□□ -2.13
H3F3AP84243 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.74□□□□□ -2.13
H3F3AP84243 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.74□□□□□ -2.13
H3F3AP84243 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.74□□□□□ -2.13
H3F3AP84243 HSPE1P3-201ENST00000559254 309 ntBASIC1.74□□□□□ -2.13
H3F3AP84243 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.74□□□□□ -2.13
H3F3AP84243 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.74□□□□□ -2.13
H3F3AP84243 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.74□□□□□ -2.13
H3F3AP84243 AC087241.4-201ENST00000612441 480 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms