Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC108210.2-201ENST00000503681 201 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 RPL37P25-201ENST00000507308 276 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.68□□□□□ -1.98
CCNA1P78396 SCARNA11.3-201ENST00000517276 130 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 AP003355.1-201ENST00000518956 587 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 AC104417.1-201ENST00000523974 751 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.68□□□□□ -1.98
CCNA1P78396 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.68□□□□□ -1.98
CCNA1P78396 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
CCNA1P78396 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.68□□□□□ -1.98
CCNA1P78396 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.68□□□□□ -1.98
CCNA1P78396 ELOCP31-201ENST00000540463 467 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.68□□□□□ -1.98
CCNA1P78396 AL132857.1-201ENST00000555180 708 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.68□□□□□ -1.98
CCNA1P78396 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.68□□□□□ -1.98
CCNA1P78396 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.68□□□□□ -1.98
CCNA1P78396 AL356280.1-201ENST00000603614 379 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 AC120053.1-201ENST00000607706 736 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 AC008498.1-201ENST00000613012 531 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 AC008759.3-201ENST00000613300 508 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 AC110994.2-201ENST00000635481 492 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCNA1P78396 MTND5P6-201ENST00000422338 1798 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CCNA1P78396 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 RNU1-138P-201ENST00000384093 164 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 RNU6-217P-201ENST00000384164 104 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 SNORD65.1-201ENST00000390889 71 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.67□□□□□ -1.98
CCNA1P78396 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.67□□□□□ -1.98
CCNA1P78396 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.67□□□□□ -1.98
CCNA1P78396 ZNF863P-201ENST00000426746 417 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 AC092634.2-201ENST00000428146 1010 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 AL591806.2-201ENST00000433122 173 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 RPL36AP6-201ENST00000435770 321 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 UBE2V1P13-201ENST00000436983 439 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 AC244505.3-201ENST00000454598 187 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 snoU13.8-201ENST00000458890 104 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 RPL21P99-201ENST00000480369 423 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 TMEM251P1-201ENST00000503717 318 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 SUMO2P6-201ENST00000505273 288 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 AC104090.1-201ENST00000506341 1171 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 AC107222.1-201ENST00000510899 637 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.67□□□□□ -1.98
CCNA1P78396 HSPE1P18-201ENST00000517602 280 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.67□□□□□ -1.98
CCNA1P78396 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.67□□□□□ -1.98
CCNA1P78396 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCNA1P78396 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.67□□□□□ -1.98
CCNA1P78396 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.67□□□□□ -1.98
CCNA1P78396 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
CCNA1P78396 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.67□□□□□ -1.98
CCNA1P78396 AL391261.3-201ENST00000557194 520 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.67□□□□□ -1.98
CCNA1P78396 AC015712.3-201ENST00000559380 164 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.67□□□□□ -1.98
CCNA1P78396 AC105137.2-201ENST00000569073 466 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 MTND4LP25-201ENST00000570218 163 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.67□□□□□ -1.98
CCNA1P78396 AL158211.4-201ENST00000606988 584 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 AC067747.1-201ENST00000608026 250 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 AC253576.2-201ENST00000618815 580 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 AC002550.2-201ENST00000621246 394 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 AC068880.4-201ENST00000623082 495 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 PISRT1-201ENST00000626175 531 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 MIR7515-201ENST00000637837 67 ntBASIC2.67□□□□□ -1.98
CCNA1P78396 CDR1-202ENST00000625883 1485 ntBASIC2.66□□□□□ -1.98
CCNA1P78396 SNORA38-201ENST00000363946 132 ntBASIC2.66□□□□□ -1.98
CCNA1P78396 RNU6-707P-201ENST00000364647 95 ntBASIC2.66□□□□□ -1.98
CCNA1P78396 SNORA67.1-201ENST00000364749 141 ntBASIC2.66□□□□□ -1.98
CCNA1P78396 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCNA1P78396 AL603865.2-201ENST00000401679 213 ntBASIC2.66□□□□□ -1.98
CCNA1P78396 TPMTP3-201ENST00000411928 735 ntBASIC2.66□□□□□ -1.98
CCNA1P78396 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.66□□□□□ -1.98
CCNA1P78396 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.66□□□□□ -1.98
CCNA1P78396 IFNA11P-201ENST00000446352 526 ntBASIC2.66□□□□□ -1.98
CCNA1P78396 AC092902.1-201ENST00000486999 259 ntBASIC2.66□□□□□ -1.98
CCNA1P78396 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCNA1P78396 EIF4EP3-201ENST00000498782 656 ntBASIC2.66□□□□□ -1.98
CCNA1P78396 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.66□□□□□ -1.98
CCNA1P78396 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.66□□□□□ -1.98
CCNA1P78396 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.66□□□□□ -1.98
CCNA1P78396 AC025881.1-201ENST00000518851 512 ntBASIC2.66□□□□□ -1.98
CCNA1P78396 MTCYBP20-201ENST00000524239 1129 ntBASIC2.66□□□□□ -1.98
CCNA1P78396 MTCO3P15-201ENST00000526563 574 ntBASIC2.66□□□□□ -1.98
CCNA1P78396 OR5BN1P-201ENST00000532955 829 ntBASIC2.66□□□□□ -1.98
CCNA1P78396 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.66□□□□□ -1.98
CCNA1P78396 AC243773.3-201ENST00000613270 256 ntBASIC2.66□□□□□ -1.98
CCNA1P78396 AC120349.2-201ENST00000625002 298 ntBASIC2.66□□□□□ -1.98
CCNA1P78396 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CCNA1P78396 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.66□□□□□ -1.98
CCNA1P78396 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CCNA1P78396 AC010329.5-201ENST00000623497 2174 ntBASIC2.66□□□□□ -1.98
CCNA1P78396 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.98
CCNA1P78396 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.65□□□□□ -1.98
CCNA1P78396 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CCNA1P78396 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCNA1P78396 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms