Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.36□□□□□ -2.19
UBA52P62987 AP004607.1-201ENST00000524456 203 ntBASIC1.36□□□□□ -2.19
UBA52P62987 AC087441.2-201ENST00000529141 262 ntBASIC1.36□□□□□ -2.19
UBA52P62987 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.36□□□□□ -2.19
UBA52P62987 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.36□□□□□ -2.19
UBA52P62987 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.36□□□□□ -2.19
UBA52P62987 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
UBA52P62987 MTND4P23-201ENST00000447723 1363 ntBASIC1.35□□□□□ -2.19
UBA52P62987 MIR147B-201ENST00000390185 80 ntBASIC1.35□□□□□ -2.19
UBA52P62987 RN7SKP51-201ENST00000410781 304 ntBASIC1.35□□□□□ -2.19
UBA52P62987 RPS15AP38-201ENST00000413110 372 ntBASIC1.35□□□□□ -2.19
UBA52P62987 Z85995.1-201ENST00000415547 335 ntBASIC1.35□□□□□ -2.19
UBA52P62987 AC074117.2-201ENST00000417130 397 ntBASIC1.35□□□□□ -2.19
UBA52P62987 AIMP1P2-201ENST00000425294 312 ntBASIC1.35□□□□□ -2.19
UBA52P62987 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.35□□□□□ -2.19
UBA52P62987 HSPE1P21-201ENST00000438283 308 ntBASIC1.35□□□□□ -2.19
UBA52P62987 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.35□□□□□ -2.19
UBA52P62987 MTCYBP3-201ENST00000445588 1137 ntBASIC1.35□□□□□ -2.19
UBA52P62987 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.35□□□□□ -2.19
UBA52P62987 RPL23AP3-201ENST00000453844 468 ntBASIC1.35□□□□□ -2.19
UBA52P62987 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.35□□□□□ -2.19
UBA52P62987 snoU109.1-201ENST00000459339 135 ntBASIC1.35□□□□□ -2.19
UBA52P62987 AC104689.1-201ENST00000473356 768 ntBASIC1.35□□□□□ -2.19
UBA52P62987 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.35□□□□□ -2.19
UBA52P62987 AC109464.2-201ENST00000510242 943 ntBASIC1.35□□□□□ -2.19
UBA52P62987 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.35□□□□□ -2.19
UBA52P62987 RN7SKP96-201ENST00000516948 297 ntBASIC1.35□□□□□ -2.19
UBA52P62987 AC084851.1-201ENST00000529105 249 ntBASIC1.35□□□□□ -2.19
UBA52P62987 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.35□□□□□ -2.19
UBA52P62987 CYCSP2-201ENST00000558168 301 ntBASIC1.35□□□□□ -2.19
UBA52P62987 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.35□□□□□ -2.19
UBA52P62987 SNORD53B-201ENST00000577887 78 ntBASIC1.35□□□□□ -2.19
UBA52P62987 AC103987.3-201ENST00000582071 292 ntBASIC1.35□□□□□ -2.19
UBA52P62987 AC073111.2-201ENST00000605657 1075 ntBASIC1.35□□□□□ -2.19
UBA52P62987 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
UBA52P62987 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.35□□□□□ -2.19
UBA52P62987 AC027309.3-201ENST00000623419 351 ntBASIC1.35□□□□□ -2.19
UBA52P62987 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.35□□□□□ -2.19
UBA52P62987 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
UBA52P62987 AL513185.3-201ENST00000433335 1300 ntBASIC1.35□□□□□ -2.19
UBA52P62987 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
UBA52P62987 RNA5SP27-201ENST00000363839 119 ntBASIC1.34□□□□□ -2.19
UBA52P62987 RNU1-57P-201ENST00000384491 166 ntBASIC1.34□□□□□ -2.19
UBA52P62987 Y_RNA.508-201ENST00000384502 114 ntBASIC1.34□□□□□ -2.19
UBA52P62987 MIR320A-201ENST00000385302 82 ntBASIC1.34□□□□□ -2.19
UBA52P62987 RNU6-955P-201ENST00000410497 104 ntBASIC1.34□□□□□ -2.19
UBA52P62987 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.34□□□□□ -2.19
UBA52P62987 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.34□□□□□ -2.19
UBA52P62987 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.34□□□□□ -2.19
UBA52P62987 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.34□□□□□ -2.19
UBA52P62987 RNU1-98P-201ENST00000458992 160 ntBASIC1.34□□□□□ -2.19
UBA52P62987 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.34□□□□□ -2.19
UBA52P62987 CBX3P3-201ENST00000508108 532 ntBASIC1.34□□□□□ -2.19
UBA52P62987 AC021146.7-201ENST00000509604 775 ntBASIC1.34□□□□□ -2.19
UBA52P62987 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.34□□□□□ -2.19
UBA52P62987 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.34□□□□□ -2.19
UBA52P62987 AP005639.2-201ENST00000527592 928 ntBASIC1.34□□□□□ -2.19
UBA52P62987 CBX3P7-201ENST00000532876 502 ntBASIC1.34□□□□□ -2.19
UBA52P62987 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.34□□□□□ -2.19
UBA52P62987 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
UBA52P62987 AC005498.1-201ENST00000592125 465 ntBASIC1.34□□□□□ -2.19
UBA52P62987 BX248123.2-201ENST00000606318 124 ntBASIC1.34□□□□□ -2.19
UBA52P62987 AP006248.3-201ENST00000623580 594 ntBASIC1.34□□□□□ -2.19
UBA52P62987 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
UBA52P62987 AC006026.1-201ENST00000444025 1803 ntBASIC1.33□□□□□ -2.2
UBA52P62987 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
UBA52P62987 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
UBA52P62987 CDC27P3-201ENST00000635418 1910 ntBASIC1.33□□□□□ -2.2
UBA52P62987 Y_RNA.118-201ENST00000363300 101 ntBASIC1.33□□□□□ -2.2
UBA52P62987 RNU6-220P-201ENST00000390919 107 ntBASIC1.33□□□□□ -2.2
UBA52P62987 MCTS2P-201ENST00000394552 546 ntBASIC1.33□□□□□ -2.2
UBA52P62987 AL035405.1-201ENST00000400795 710 ntBASIC1.33□□□□□ -2.2
UBA52P62987 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.33□□□□□ -2.2
UBA52P62987 AL356432.1-201ENST00000405809 419 ntBASIC1.33□□□□□ -2.2
UBA52P62987 AL445183.3-201ENST00000414168 502 ntBASIC1.33□□□□□ -2.2
UBA52P62987 AC006548.1-201ENST00000427470 102 ntBASIC1.33□□□□□ -2.2
UBA52P62987 EZH2P1-201ENST00000431167 291 ntBASIC1.33□□□□□ -2.2
UBA52P62987 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.33□□□□□ -2.2
UBA52P62987 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.33□□□□□ -2.2
UBA52P62987 BNIP3P2-201ENST00000441221 577 ntBASIC1.33□□□□□ -2.2
UBA52P62987 TPTE2P6-202ENST00000445572 1007 ntBASIC1.33□□□□□ -2.2
UBA52P62987 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.33□□□□□ -2.2
UBA52P62987 AC005297.2-201ENST00000450430 606 ntBASIC1.33□□□□□ -2.2
UBA52P62987 AC009474.2-201ENST00000451383 136 ntBASIC1.33□□□□□ -2.2
UBA52P62987 SNRPGP9-201ENST00000456025 225 ntBASIC1.33□□□□□ -2.2
UBA52P62987 SNORD121B-201ENST00000458838 81 ntBASIC1.33□□□□□ -2.2
UBA52P62987 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
UBA52P62987 SNORA31.13-201ENST00000516624 135 ntBASIC1.33□□□□□ -2.2
UBA52P62987 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.33□□□□□ -2.2
UBA52P62987 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.33□□□□□ -2.2
UBA52P62987 ARL2BPP2-201ENST00000550907 489 ntBASIC1.33□□□□□ -2.2
UBA52P62987 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.33□□□□□ -2.2
UBA52P62987 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
UBA52P62987 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
UBA52P62987 CR381572.1-201ENST00000625098 102 ntBASIC1.33□□□□□ -2.2
UBA52P62987 AL512643.1-201ENST00000635735 524 ntBASIC1.33□□□□□ -2.2
UBA52P62987 MTND5P10-201ENST00000603719 1809 ntBASIC1.33□□□□□ -2.2
UBA52P62987 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
UBA52P62987 AL391987.6-201ENST00000305671 199 ntBASIC1.32□□□□□ -2.2
UBA52P62987 RNU6-1249P-201ENST00000363237 111 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms