Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC093838.1-201ENST00000613014 469 ntBASIC4.53□□□□□ -1.68
HERVK_113P62684 AL357559.1-201ENST00000622228 274 ntBASIC4.53□□□□□ -1.68
HERVK_113P62684 AC025034.2-201ENST00000623264 286 ntBASIC4.53□□□□□ -1.68
HERVK_113P62684 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.53□□□□□ -1.68
HERVK_113P62684 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HERVK_113P62684 AC090229.1-201ENST00000590983 1609 ntBASIC4.53□□□□□ -1.68
HERVK_113P62684 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HERVK_113P62684 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.53□□□□□ -1.68
HERVK_113P62684 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
HERVK_113P62684 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HERVK_113P62684 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HERVK_113P62684 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HERVK_113P62684 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.52□□□□□ -1.69
HERVK_113P62684 RNU6-1227P-201ENST00000383981 107 ntBASIC4.52□□□□□ -1.69
HERVK_113P62684 Y_RNA.431-201ENST00000384086 102 ntBASIC4.52□□□□□ -1.69
HERVK_113P62684 RNU6-831P-201ENST00000384548 107 ntBASIC4.52□□□□□ -1.69
HERVK_113P62684 AL109755.1-201ENST00000401791 649 ntBASIC4.52□□□□□ -1.69
HERVK_113P62684 SNORA3C-201ENST00000408792 125 ntBASIC4.52□□□□□ -1.69
HERVK_113P62684 RNA5SP56-201ENST00000410277 118 ntBASIC4.52□□□□□ -1.69
HERVK_113P62684 RPL21P24-201ENST00000413752 448 ntBASIC4.52□□□□□ -1.69
HERVK_113P62684 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.52□□□□□ -1.69
HERVK_113P62684 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.52□□□□□ -1.69
HERVK_113P62684 AL591419.1-201ENST00000427423 339 ntBASIC4.52□□□□□ -1.69
HERVK_113P62684 AC011742.1-201ENST00000431448 434 ntBASIC4.52□□□□□ -1.69
HERVK_113P62684 HMGN2P31-201ENST00000432430 273 ntBASIC4.52□□□□□ -1.69
HERVK_113P62684 AC024082.2-201ENST00000434771 238 ntBASIC4.52□□□□□ -1.69
HERVK_113P62684 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.52□□□□□ -1.69
HERVK_113P62684 RPL21P11-201ENST00000461458 483 ntBASIC4.52□□□□□ -1.69
HERVK_113P62684 AL133162.1-201ENST00000463228 453 ntBASIC4.52□□□□□ -1.69
HERVK_113P62684 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HERVK_113P62684 AC110768.1-201ENST00000509222 400 ntBASIC4.52□□□□□ -1.69
HERVK_113P62684 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.52□□□□□ -1.69
HERVK_113P62684 IGKV2D-19-201ENST00000523346 262 ntBASIC4.52□□□□□ -1.69
HERVK_113P62684 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.52□□□□□ -1.69
HERVK_113P62684 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.52□□□□□ -1.69
HERVK_113P62684 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.52□□□□□ -1.69
HERVK_113P62684 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.52□□□□□ -1.69
HERVK_113P62684 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.52□□□□□ -1.69
HERVK_113P62684 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.52□□□□□ -1.69
HERVK_113P62684 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.52□□□□□ -1.69
HERVK_113P62684 C2orf27A-204ENST00000623058 969 ntBASIC4.52□□□□□ -1.69
HERVK_113P62684 AC011155.2-201ENST00000623202 216 ntBASIC4.52□□□□□ -1.69
HERVK_113P62684 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.52□□□□□ -1.69
HERVK_113P62684 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HERVK_113P62684 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
HERVK_113P62684 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.52□□□□□ -1.69
HERVK_113P62684 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
HERVK_113P62684 BDP1P-201ENST00000582658 1990 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.51□□□□□ -1.69
HERVK_113P62684 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.51□□□□□ -1.69
HERVK_113P62684 Y_RNA.100-201ENST00000363141 102 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 SNORA9-201ENST00000384215 133 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 SNORD3H-201ENST00000384486 214 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 RNU6-754P-201ENST00000391166 107 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 UBE2V1P2-201ENST00000397758 440 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 AL590004.1-201ENST00000405321 300 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.51□□□□□ -1.69
HERVK_113P62684 HSPE1P1-201ENST00000421494 318 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 AL139247.1-201ENST00000422768 325 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.51□□□□□ -1.69
HERVK_113P62684 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.51□□□□□ -1.69
HERVK_113P62684 CYCSP43-201ENST00000438233 310 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 SNORD97-201ENST00000459187 142 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 Y_RNA.632-201ENST00000459189 102 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 AC091885.1-201ENST00000506658 268 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.51□□□□□ -1.69
HERVK_113P62684 IGKV2-23-201ENST00000518729 323 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 AC103783.1-201ENST00000520506 373 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.51□□□□□ -1.69
HERVK_113P62684 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HERVK_113P62684 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.51□□□□□ -1.69
HERVK_113P62684 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.51□□□□□ -1.69
HERVK_113P62684 AC021646.1-201ENST00000605469 484 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 PART1_1.1-201ENST00000611761 217 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 uc_338.34-201ENST00000617467 174 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.51□□□□□ -1.69
HERVK_113P62684 AC015967.1-201ENST00000619893 476 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.51□□□□□ -1.69
HERVK_113P62684 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
HERVK_113P62684 GABPAP-201ENST00000419271 1356 ntBASIC4.51□□□□□ -1.69
HERVK_113P62684 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
HERVK_113P62684 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.5□□□□□ -1.69
HERVK_113P62684 MARK2P15-201ENST00000432204 2186 ntBASIC4.5□□□□□ -1.69
HERVK_113P62684 ZNF33CP-201ENST00000432492 2030 ntBASIC4.5□□□□□ -1.69
HERVK_113P62684 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HERVK_113P62684 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HERVK_113P62684 RNU6-1287P-201ENST00000362914 107 ntBASIC4.5□□□□□ -1.69
HERVK_113P62684 SNORA24.1-201ENST00000384401 135 ntBASIC4.5□□□□□ -1.69
HERVK_113P62684 SNORA70E-201ENST00000384492 135 ntBASIC4.5□□□□□ -1.69
HERVK_113P62684 RNU6-1060P-201ENST00000384664 107 ntBASIC4.5□□□□□ -1.69
HERVK_113P62684 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HERVK_113P62684 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HERVK_113P62684 AL035423.1-201ENST00000420331 213 ntBASIC4.5□□□□□ -1.69
HERVK_113P62684 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.5□□□□□ -1.69
HERVK_113P62684 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.5□□□□□ -1.69
HERVK_113P62684 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.5□□□□□ -1.69
HERVK_113P62684 PPIAP3-201ENST00000450588 505 ntBASIC4.5□□□□□ -1.69
HERVK_113P62684 MTND4P17-201ENST00000470444 350 ntBASIC4.5□□□□□ -1.69
HERVK_113P62684 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms