Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.56□□□□□ -1.84
NR1H2P55055 AC005183.1-201ENST00000603687 1979 ntBASIC3.56□□□□□ -1.84
NR1H2P55055 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.56□□□□□ -1.84
NR1H2P55055 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.55□□□□□ -1.84
NR1H2P55055 ZNF826P-207ENST00000622273 1910 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 OR5J1P-201ENST00000313544 939 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 RNU6-1035P-201ENST00000384477 107 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 NDUFS5P1-201ENST00000405668 289 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 RNA5SP44-201ENST00000410446 133 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 Y_RNA.599-201ENST00000410489 109 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NR1H2P55055 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NR1H2P55055 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.55□□□□□ -1.84
NR1H2P55055 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.55□□□□□ -1.84
NR1H2P55055 AC007919.1-201ENST00000429380 217 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 YME1L1P1-201ENST00000429435 297 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 AL158071.1-201ENST00000430315 461 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.55□□□□□ -1.84
NR1H2P55055 Z74696.2-201ENST00000436514 498 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.55□□□□□ -1.84
NR1H2P55055 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.55□□□□□ -1.84
NR1H2P55055 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.55□□□□□ -1.84
NR1H2P55055 AC110768.1-201ENST00000509222 400 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 RNU6-352P-201ENST00000516908 107 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 RNA5SP337-201ENST00000517007 109 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.55□□□□□ -1.84
NR1H2P55055 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.55□□□□□ -1.84
NR1H2P55055 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.55□□□□□ -1.84
NR1H2P55055 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.55□□□□□ -1.84
NR1H2P55055 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.55□□□□□ -1.84
NR1H2P55055 AMZ2P1-203ENST00000565833 850 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 AC025627.2-201ENST00000576220 160 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 MIR5685-201ENST00000579080 79 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.55□□□□□ -1.84
NR1H2P55055 MIR5684-201ENST00000585074 65 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.55□□□□□ -1.84
NR1H2P55055 HSPE1P7-201ENST00000604681 321 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 AP000860.1-201ENST00000605250 559 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.55□□□□□ -1.84
NR1H2P55055 AL021997.1-201ENST00000605757 193 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 MIR98-201ENST00000606724 119 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 AC034102.8-201ENST00000615146 484 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 AC039056.2-201ENST00000622261 511 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NR1H2P55055 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.55□□□□□ -1.84
NR1H2P55055 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.55□□□□□ -1.84
NR1H2P55055 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NR1H2P55055 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NR1H2P55055 MFSD8-236ENST00000641509 4050 ntBASIC3.55□□□□□ -1.84
NR1H2P55055 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NR1H2P55055 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
NR1H2P55055 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NR1H2P55055 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NR1H2P55055 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
NR1H2P55055 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NR1H2P55055 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
NR1H2P55055 RNU1-75P-201ENST00000347264 129 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 SNORD46.1-201ENST00000364139 104 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 RN7SKP226-201ENST00000364912 300 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 SNORA20.2-201ENST00000383922 131 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NR1H2P55055 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.54□□□□□ -1.84
NR1H2P55055 Y_RNA.619-201ENST00000410951 90 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.54□□□□□ -1.84
NR1H2P55055 ELOCP4-201ENST00000420090 333 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 PIGFP2-201ENST00000421400 651 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 AC012498.1-201ENST00000424037 437 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.54□□□□□ -1.84
NR1H2P55055 AC091390.3-201ENST00000426478 338 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 AC006989.1-201ENST00000427212 131 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 RPL23AP82-202ENST00000427528 469 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 AC018644.1-201ENST00000429934 551 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.54□□□□□ -1.84
NR1H2P55055 FCF1P1-201ENST00000432690 571 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 HIGD1AP11-201ENST00000438361 280 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.54□□□□□ -1.84
NR1H2P55055 BNIP3P2-201ENST00000441221 577 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.54□□□□□ -1.84
NR1H2P55055 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.54□□□□□ -1.84
NR1H2P55055 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.54□□□□□ -1.84
NR1H2P55055 AC079448.1-201ENST00000449377 373 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 RNU6-953P-201ENST00000459154 107 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.54□□□□□ -1.84
NR1H2P55055 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.54□□□□□ -1.84
NR1H2P55055 RPL7P49-201ENST00000471402 708 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
NR1H2P55055 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.54□□□□□ -1.84
NR1H2P55055 AC107401.1-201ENST00000503426 685 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
NR1H2P55055 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.54□□□□□ -1.84
NR1H2P55055 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.54□□□□□ -1.84
NR1H2P55055 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.54□□□□□ -1.84
NR1H2P55055 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
NR1H2P55055 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.54□□□□□ -1.84
NR1H2P55055 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.54□□□□□ -1.84
NR1H2P55055 RPL21P12-201ENST00000559810 515 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.54□□□□□ -1.84
NR1H2P55055 MIR3167-201ENST00000579623 85 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 AC174048.1-201ENST00000603389 144 ntBASIC3.54□□□□□ -1.84
NR1H2P55055 AC107294.1-201ENST00000609524 467 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms