Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CACNA2D1P54289 ZNF33CP-201ENST00000432492 2030 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 RNU5E-8P-201ENST00000363502 116 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 RNY3P13-201ENST00000365542 102 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.99□□□□□ -1.77
CACNA2D1P54289 SNORD37.1-201ENST00000390968 65 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.99□□□□□ -1.77
CACNA2D1P54289 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.99□□□□□ -1.77
CACNA2D1P54289 AL645937.1-202ENST00000421799 937 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.99□□□□□ -1.77
CACNA2D1P54289 PSMA2P3-201ENST00000429685 675 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 OR4K11P-201ENST00000431829 904 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.99□□□□□ -1.77
CACNA2D1P54289 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CACNA2D1P54289 BRK1P2-201ENST00000442875 223 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 BX276092.4-201ENST00000452056 248 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 MTND3P16-201ENST00000452205 344 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 snoU13.8-201ENST00000458890 104 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 RNU6-329P-201ENST00000459618 107 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 MTND4P17-201ENST00000470444 350 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.99□□□□□ -1.77
CACNA2D1P54289 UBE2CP3-201ENST00000502715 450 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 TTC39CP1-201ENST00000512513 755 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 AC104057.1-201ENST00000515547 497 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.99□□□□□ -1.77
CACNA2D1P54289 SUMO2P20-201ENST00000520803 283 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.99□□□□□ -1.77
CACNA2D1P54289 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.99□□□□□ -1.77
CACNA2D1P54289 OR4K8P-201ENST00000578842 1048 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 GLUD1P4-201ENST00000590914 418 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 AC010591.1-201ENST00000603941 649 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 uc_338.32-201ENST00000615087 172 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 MIR4496-201ENST00000635896 61 ntBASIC3.99□□□□□ -1.77
CACNA2D1P54289 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CACNA2D1P54289 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CACNA2D1P54289 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CACNA2D1P54289 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CACNA2D1P54289 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.99□□□□□ -1.77
CACNA2D1P54289 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CACNA2D1P54289 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.99□□□□□ -1.77
CACNA2D1P54289 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CACNA2D1P54289 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CACNA2D1P54289 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.98□□□□□ -1.77
CACNA2D1P54289 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CACNA2D1P54289 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
CACNA2D1P54289 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CACNA2D1P54289 OR1S2-201ENST00000302592 978 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 SNORA62.3-201ENST00000365110 153 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 Y_RNA.367-201ENST00000365544 101 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 RNU4-20P-201ENST00000365601 151 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 Y_RNA.384-201ENST00000383909 102 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 RNU6-606P-201ENST00000384721 111 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 U3.20-201ENST00000390909 217 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 SNORA75.4-201ENST00000391278 119 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 RN7SKP140-201ENST00000411196 284 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.98□□□□□ -1.77
CACNA2D1P54289 RPS7P15-201ENST00000415804 584 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 AC127526.1-201ENST00000417526 366 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 SYF2P2-201ENST00000417620 583 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 AC137499.1-201ENST00000427602 88 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.98□□□□□ -1.77
CACNA2D1P54289 RPS20P5-201ENST00000434808 360 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 TIMM9P1-201ENST00000436122 256 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 FTH1P1-201ENST00000437933 532 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 DDX3P2-201ENST00000446138 111 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 RPL21P129-201ENST00000491732 478 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.98□□□□□ -1.77
CACNA2D1P54289 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.98□□□□□ -1.77
CACNA2D1P54289 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.98□□□□□ -1.77
CACNA2D1P54289 AC004062.1-201ENST00000509926 645 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 AC114797.1-201ENST00000514003 728 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.98□□□□□ -1.77
CACNA2D1P54289 AC103843.2-201ENST00000530523 682 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.98□□□□□ -1.77
CACNA2D1P54289 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.98□□□□□ -1.77
CACNA2D1P54289 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.98□□□□□ -1.77
CACNA2D1P54289 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.98□□□□□ -1.77
CACNA2D1P54289 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.98□□□□□ -1.77
CACNA2D1P54289 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.98□□□□□ -1.77
CACNA2D1P54289 AL121992.2-201ENST00000606262 256 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 AL133216.2-202ENST00000634512 349 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 AC119674.1-207ENST00000641355 633 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CACNA2D1P54289 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.98□□□□□ -1.77
CACNA2D1P54289 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
CACNA2D1P54289 AC011460.1-201ENST00000636268 1834 ntBASIC3.98□□□□□ -1.77
CACNA2D1P54289 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CACNA2D1P54289 IPO8P1-201ENST00000455509 3109 ntBASIC3.97□□□□□ -1.77
CACNA2D1P54289 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CACNA2D1P54289 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.97□□□□□ -1.77
CACNA2D1P54289 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CACNA2D1P54289 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CACNA2D1P54289 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CACNA2D1P54289 RNA5SP258-201ENST00000362750 119 ntBASIC3.97□□□□□ -1.77
CACNA2D1P54289 RN7SKP44-201ENST00000363602 316 ntBASIC3.97□□□□□ -1.77
CACNA2D1P54289 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CACNA2D1P54289 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.97□□□□□ -1.77
CACNA2D1P54289 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.97□□□□□ -1.77
CACNA2D1P54289 RNU6-831P-201ENST00000384548 107 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms