Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 AC133104.1-201ENST00000429100 218 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 MTCYBP9-201ENST00000431021 303 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 PRDX3P3-201ENST00000447765 522 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 RPS11P1-201ENST00000451072 473 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 AC010285.1-201ENST00000470580 392 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 AC007182.2-201ENST00000489251 402 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 RPL29P14-201ENST00000495837 428 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 RPL23AP55-201ENST00000498163 452 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 AC074250.1-201ENST00000511117 192 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 AC105914.1-201ENST00000511798 226 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 RPL23AP94-201ENST00000512518 302 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.22□□□□□ -1.73
ATXN1P54253 RNU1-103P-201ENST00000516502 125 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 RNU6-388P-201ENST00000517012 105 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 RNU6-389P-201ENST00000517048 105 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 RNU6-1073P-201ENST00000517182 106 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 RN7SKP40-201ENST00000517211 242 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.22□□□□□ -1.73
ATXN1P54253 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.22□□□□□ -1.73
ATXN1P54253 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.22□□□□□ -1.73
ATXN1P54253 HMGB1P33-201ENST00000563485 527 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 AC099489.2-201ENST00000574976 260 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 MIR98-201ENST00000606724 119 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 MIR6868-201ENST00000611215 58 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.22□□□□□ -1.73
ATXN1P54253 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.22□□□□□ -1.73
ATXN1P54253 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATXN1P54253 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.22□□□□□ -1.73
ATXN1P54253 AL365440.1-201ENST00000436135 2167 ntBASIC4.21□□□□□ -1.73
ATXN1P54253 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
ATXN1P54253 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
ATXN1P54253 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
ATXN1P54253 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.21□□□□□ -1.74
ATXN1P54253 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.21□□□□□ -1.74
ATXN1P54253 RNU6-379P-201ENST00000363813 104 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 SNORA22B-201ENST00000383876 138 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 Y_RNA.422-201ENST00000384054 114 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 RNU6-767P-201ENST00000384132 107 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 RNU6-1103P-201ENST00000384150 107 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 RNU6-308P-201ENST00000390957 107 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 RNU2-37P-201ENST00000410695 177 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 RNU4-6P-201ENST00000410804 122 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.21□□□□□ -1.74
ATXN1P54253 USP9YP27-201ENST00000418455 438 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 RPL21P66-201ENST00000426566 466 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 AL669831.1-202ENST00000428504 417 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.21□□□□□ -1.74
ATXN1P54253 AC002486.1-201ENST00000435098 391 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.21□□□□□ -1.74
ATXN1P54253 AC008481.1-201ENST00000463278 396 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 RPL9P32-201ENST00000464118 620 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 Vault.3-201ENST00000516676 95 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 SNORA31.20-201ENST00000517111 133 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 Y_RNA.720-201ENST00000517166 92 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 AP005902.1-201ENST00000521358 186 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.21□□□□□ -1.74
ATXN1P54253 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.21□□□□□ -1.74
ATXN1P54253 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.21□□□□□ -1.74
ATXN1P54253 FAM157A-202ENST00000615155 405 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 AL354798.1-201ENST00000622505 329 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 AL158801.5-201ENST00000623123 465 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 AC091925.2-201ENST00000625059 256 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 AL034408.1-202ENST00000636088 415 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 AL773545.4-201ENST00000637262 310 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 AL513478.4-201ENST00000641636 310 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.21□□□□□ -1.74
ATXN1P54253 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ATXN1P54253 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.21□□□□□ -1.74
ATXN1P54253 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
ATXN1P54253 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
ATXN1P54253 RIOK3P1-201ENST00000418778 1528 ntBASIC4.21□□□□□ -1.74
ATXN1P54253 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
ATXN1P54253 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.2□□□□□ -1.74
ATXN1P54253 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATXN1P54253 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ATXN1P54253 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
ATXN1P54253 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
ATXN1P54253 AL359854.1-201ENST00000614203 1594 ntBASIC4.2□□□□□ -1.74
ATXN1P54253 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
ATXN1P54253 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ATXN1P54253 Y_RNA.202-201ENST00000364083 110 ntBASIC4.2□□□□□ -1.74
ATXN1P54253 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.2□□□□□ -1.74
ATXN1P54253 RNU6-877P-201ENST00000383868 107 ntBASIC4.2□□□□□ -1.74
ATXN1P54253 Y_RNA.431-201ENST00000384086 102 ntBASIC4.2□□□□□ -1.74
ATXN1P54253 AL109755.1-201ENST00000401791 649 ntBASIC4.2□□□□□ -1.74
ATXN1P54253 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.2□□□□□ -1.74
ATXN1P54253 JKAMPP1-201ENST00000413804 919 ntBASIC4.2□□□□□ -1.74
ATXN1P54253 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.2□□□□□ -1.74
ATXN1P54253 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.2□□□□□ -1.74
ATXN1P54253 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.2□□□□□ -1.74
ATXN1P54253 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.2□□□□□ -1.74
ATXN1P54253 RPL23AP50-201ENST00000434149 455 ntBASIC4.2□□□□□ -1.74
ATXN1P54253 AC108734.1-201ENST00000439549 399 ntBASIC4.2□□□□□ -1.74
ATXN1P54253 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.2□□□□□ -1.74
ATXN1P54253 AC006480.1-201ENST00000449887 378 ntBASIC4.2□□□□□ -1.74
ATXN1P54253 snoU109.4-201ENST00000458953 143 ntBASIC4.2□□□□□ -1.74
ATXN1P54253 RPS4XP10-201ENST00000465034 731 ntBASIC4.2□□□□□ -1.74
ATXN1P54253 AC023598.1-201ENST00000472521 361 ntBASIC4.2□□□□□ -1.74
ATXN1P54253 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.2□□□□□ -1.74
ATXN1P54253 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms