Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
COPAP53621 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COPAP53621 RNU5A-1-201ENST00000362698 116 ntBASIC3.92□□□□□ -1.78
COPAP53621 RNU6-1120P-201ENST00000362988 108 ntBASIC3.92□□□□□ -1.78
COPAP53621 Y_RNA.159-201ENST00000363674 87 ntBASIC3.92□□□□□ -1.78
COPAP53621 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.92□□□□□ -1.78
COPAP53621 RN7SKP285-201ENST00000410137 318 ntBASIC3.92□□□□□ -1.78
COPAP53621 AC093578.1-201ENST00000415219 368 ntBASIC3.92□□□□□ -1.78
COPAP53621 USP9YP27-201ENST00000418455 438 ntBASIC3.92□□□□□ -1.78
COPAP53621 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.92□□□□□ -1.78
COPAP53621 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.92□□□□□ -1.78
COPAP53621 AC027673.1-201ENST00000456245 405 ntBASIC3.92□□□□□ -1.78
COPAP53621 SNORD97-201ENST00000459187 142 ntBASIC3.92□□□□□ -1.78
COPAP53621 RPL21P11-201ENST00000461458 483 ntBASIC3.92□□□□□ -1.78
COPAP53621 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COPAP53621 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.92□□□□□ -1.78
COPAP53621 PRDX4P1-201ENST00000507189 574 ntBASIC3.92□□□□□ -1.78
COPAP53621 Y_RNA.704-201ENST00000516851 102 ntBASIC3.92□□□□□ -1.78
COPAP53621 OR4R1P-201ENST00000529879 463 ntBASIC3.92□□□□□ -1.78
COPAP53621 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COPAP53621 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.92□□□□□ -1.78
COPAP53621 AK6P1-201ENST00000540219 478 ntBASIC3.92□□□□□ -1.78
COPAP53621 AC093012.1-202ENST00000549403 582 ntBASIC3.92□□□□□ -1.78
COPAP53621 AL359212.1-201ENST00000556608 614 ntBASIC3.92□□□□□ -1.78
COPAP53621 MED28P6-201ENST00000558776 231 ntBASIC3.92□□□□□ -1.78
COPAP53621 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.92□□□□□ -1.78
COPAP53621 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.92□□□□□ -1.78
COPAP53621 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.92□□□□□ -1.78
COPAP53621 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.92□□□□□ -1.78
COPAP53621 AC104458.1-201ENST00000608243 463 ntBASIC3.92□□□□□ -1.78
COPAP53621 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.92□□□□□ -1.78
COPAP53621 AC004696.1-201ENST00000614345 607 ntBASIC3.92□□□□□ -1.78
COPAP53621 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.92□□□□□ -1.78
COPAP53621 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COPAP53621 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.92□□□□□ -1.78
COPAP53621 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
COPAP53621 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
COPAP53621 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
COPAP53621 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COPAP53621 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COPAP53621 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COPAP53621 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COPAP53621 RNA5SP119-201ENST00000362715 117 ntBASIC3.91□□□□□ -1.78
COPAP53621 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
COPAP53621 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
COPAP53621 SNORA5A-201ENST00000384111 134 ntBASIC3.91□□□□□ -1.78
COPAP53621 AL359634.1-202ENST00000404721 284 ntBASIC3.91□□□□□ -1.78
COPAP53621 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.91□□□□□ -1.78
COPAP53621 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.91□□□□□ -1.78
COPAP53621 AC009237.5-201ENST00000414271 501 ntBASIC3.91□□□□□ -1.78
COPAP53621 SYF2P2-201ENST00000417620 583 ntBASIC3.91□□□□□ -1.78
COPAP53621 AL139247.1-201ENST00000422768 325 ntBASIC3.91□□□□□ -1.78
COPAP53621 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.91□□□□□ -1.78
COPAP53621 MTCO1P20-201ENST00000425366 358 ntBASIC3.91□□□□□ -1.78
COPAP53621 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.91□□□□□ -1.78
COPAP53621 AL591419.1-201ENST00000427423 339 ntBASIC3.91□□□□□ -1.78
COPAP53621 OR2AS1P-201ENST00000427827 319 ntBASIC3.91□□□□□ -1.78
COPAP53621 YME1L1P1-201ENST00000429435 297 ntBASIC3.91□□□□□ -1.78
COPAP53621 AC091286.1-201ENST00000431233 461 ntBASIC3.91□□□□□ -1.78
COPAP53621 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.91□□□□□ -1.78
COPAP53621 HMGB3P12-201ENST00000438745 556 ntBASIC3.91□□□□□ -1.78
COPAP53621 AL353572.1-201ENST00000442490 417 ntBASIC3.91□□□□□ -1.78
COPAP53621 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.91□□□□□ -1.78
COPAP53621 AL133162.1-201ENST00000463228 453 ntBASIC3.91□□□□□ -1.78
COPAP53621 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.91□□□□□ -1.78
COPAP53621 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COPAP53621 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.91□□□□□ -1.78
COPAP53621 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.91□□□□□ -1.78
COPAP53621 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.91□□□□□ -1.78
COPAP53621 AP001330.5-201ENST00000607176 411 ntBASIC3.91□□□□□ -1.78
COPAP53621 AC008536.2-201ENST00000607284 349 ntBASIC3.91□□□□□ -1.78
COPAP53621 SDR42E1P2-201ENST00000614861 481 ntBASIC3.91□□□□□ -1.78
COPAP53621 AC010133.1-201ENST00000615809 842 ntBASIC3.91□□□□□ -1.78
COPAP53621 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COPAP53621 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COPAP53621 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
COPAP53621 HSPA8P1-201ENST00000425843 1833 ntBASIC3.91□□□□□ -1.78
COPAP53621 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
COPAP53621 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
COPAP53621 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
COPAP53621 AC006504.1-201ENST00000562493 3666 ntBASIC3.9□□□□□ -1.78
COPAP53621 RNU6-1090P-201ENST00000364065 94 ntBASIC3.9□□□□□ -1.79
COPAP53621 RNU6-1322P-201ENST00000364309 107 ntBASIC3.9□□□□□ -1.79
COPAP53621 RNU5E-6P-201ENST00000365574 115 ntBASIC3.9□□□□□ -1.79
COPAP53621 RNU6-641P-201ENST00000384006 107 ntBASIC3.9□□□□□ -1.79
COPAP53621 MIR558-201ENST00000384920 94 ntBASIC3.9□□□□□ -1.79
COPAP53621 RPL21P17-201ENST00000397467 475 ntBASIC3.9□□□□□ -1.79
COPAP53621 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.9□□□□□ -1.79
COPAP53621 HMGB3P20-201ENST00000417997 600 ntBASIC3.9□□□□□ -1.79
COPAP53621 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.9□□□□□ -1.79
COPAP53621 RPL7L1P10-201ENST00000427790 463 ntBASIC3.9□□□□□ -1.79
COPAP53621 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.9□□□□□ -1.79
COPAP53621 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.9□□□□□ -1.79
COPAP53621 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.9□□□□□ -1.79
COPAP53621 RANP8-201ENST00000444720 713 ntBASIC3.9□□□□□ -1.79
COPAP53621 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.9□□□□□ -1.79
COPAP53621 U3.44-201ENST00000458938 192 ntBASIC3.9□□□□□ -1.79
COPAP53621 FAM92A1P2-202ENST00000504766 877 ntBASIC3.9□□□□□ -1.79
COPAP53621 AC116353.2-201ENST00000505332 712 ntBASIC3.9□□□□□ -1.79
COPAP53621 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms