Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC008481.1-201ENST00000463278 396 ntBASIC3.15□□□□□ -1.91
PDX1P52945 KLF3P2-201ENST00000465138 268 ntBASIC3.15□□□□□ -1.91
PDX1P52945 AC021205.2-201ENST00000480069 347 ntBASIC3.15□□□□□ -1.91
PDX1P52945 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PDX1P52945 RPS4XP13-201ENST00000483219 789 ntBASIC3.15□□□□□ -1.91
PDX1P52945 LARP1BP2-201ENST00000486594 519 ntBASIC3.15□□□□□ -1.91
PDX1P52945 AC097462.2-201ENST00000504623 481 ntBASIC3.15□□□□□ -1.91
PDX1P52945 VN1R104P-201ENST00000505115 1009 ntBASIC3.15□□□□□ -1.91
PDX1P52945 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.15□□□□□ -1.91
PDX1P52945 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.15□□□□□ -1.91
PDX1P52945 Y_RNA.672-201ENST00000516289 104 ntBASIC3.15□□□□□ -1.91
PDX1P52945 SNORA70.16-201ENST00000516390 95 ntBASIC3.15□□□□□ -1.91
PDX1P52945 SNORA18.6-201ENST00000516792 115 ntBASIC3.15□□□□□ -1.91
PDX1P52945 SYF2P1-201ENST00000550658 413 ntBASIC3.15□□□□□ -1.91
PDX1P52945 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.15□□□□□ -1.91
PDX1P52945 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.15□□□□□ -1.91
PDX1P52945 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.15□□□□□ -1.91
PDX1P52945 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.15□□□□□ -1.91
PDX1P52945 MIR4528-201ENST00000577763 90 ntBASIC3.15□□□□□ -1.91
PDX1P52945 AC004223.2-201ENST00000590309 544 ntBASIC3.15□□□□□ -1.91
PDX1P52945 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.15□□□□□ -1.91
PDX1P52945 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.15□□□□□ -1.91
PDX1P52945 AC006023.2-201ENST00000609916 167 ntBASIC3.15□□□□□ -1.91
PDX1P52945 AC090970.3-201ENST00000612566 866 ntBASIC3.15□□□□□ -1.91
PDX1P52945 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.15□□□□□ -1.91
PDX1P52945 AC108479.2-201ENST00000617314 601 ntBASIC3.15□□□□□ -1.91
PDX1P52945 AC006338.1-201ENST00000618453 749 ntBASIC3.15□□□□□ -1.91
PDX1P52945 AC092326.2-201ENST00000624772 1561 ntBASIC3.15□□□□□ -1.91
PDX1P52945 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
PDX1P52945 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PDX1P52945 AC118273.1-201ENST00000525324 3006 ntBASIC3.14□□□□□ -1.91
PDX1P52945 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDX1P52945 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDX1P52945 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.14□□□□□ -1.91
PDX1P52945 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
PDX1P52945 OR5H15-201ENST00000383696 930 ntBASIC3.14□□□□□ -1.91
PDX1P52945 Y_RNA.500-201ENST00000384466 111 ntBASIC3.14□□□□□ -1.91
PDX1P52945 SNORA44-201ENST00000384584 132 ntBASIC3.14□□□□□ -1.91
PDX1P52945 RPL5P18-201ENST00000406671 891 ntBASIC3.14□□□□□ -1.91
PDX1P52945 RNA5SP129-201ENST00000410276 118 ntBASIC3.14□□□□□ -1.91
PDX1P52945 RPL21P24-201ENST00000413752 448 ntBASIC3.14□□□□□ -1.91
PDX1P52945 HMGB3P23-201ENST00000414981 585 ntBASIC3.14□□□□□ -1.91
PDX1P52945 USP9YP14-201ENST00000430663 563 ntBASIC3.14□□□□□ -1.91
PDX1P52945 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.14□□□□□ -1.91
PDX1P52945 AC104850.1-201ENST00000435940 476 ntBASIC3.14□□□□□ -1.91
PDX1P52945 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.14□□□□□ -1.91
PDX1P52945 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.14□□□□□ -1.91
PDX1P52945 ELOCP30-201ENST00000447108 299 ntBASIC3.14□□□□□ -1.91
PDX1P52945 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.14□□□□□ -1.91
PDX1P52945 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.14□□□□□ -1.91
PDX1P52945 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.14□□□□□ -1.91
PDX1P52945 AC108059.3-201ENST00000456388 214 ntBASIC3.14□□□□□ -1.91
PDX1P52945 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.14□□□□□ -1.91
PDX1P52945 snoU109.1-201ENST00000459339 135 ntBASIC3.14□□□□□ -1.91
PDX1P52945 RN7SL863P-201ENST00000462370 296 ntBASIC3.14□□□□□ -1.91
PDX1P52945 SNRPGP3-201ENST00000469405 227 ntBASIC3.14□□□□□ -1.91
PDX1P52945 HSPE1P6-201ENST00000479457 291 ntBASIC3.14□□□□□ -1.91
PDX1P52945 AL049874.1-201ENST00000489560 388 ntBASIC3.14□□□□□ -1.91
PDX1P52945 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.14□□□□□ -1.91
PDX1P52945 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.14□□□□□ -1.91
PDX1P52945 AC105914.1-201ENST00000511798 226 ntBASIC3.14□□□□□ -1.91
PDX1P52945 MTND3P5-201ENST00000512798 333 ntBASIC3.14□□□□□ -1.91
PDX1P52945 AC114797.1-201ENST00000514003 728 ntBASIC3.14□□□□□ -1.91
PDX1P52945 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.14□□□□□ -1.91
PDX1P52945 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.14□□□□□ -1.91
PDX1P52945 AC123904.3-201ENST00000547218 814 ntBASIC3.14□□□□□ -1.91
PDX1P52945 HIGD1AP1-201ENST00000550979 275 ntBASIC3.14□□□□□ -1.91
PDX1P52945 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.14□□□□□ -1.91
PDX1P52945 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.14□□□□□ -1.91
PDX1P52945 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.14□□□□□ -1.91
PDX1P52945 AGGF1P4-201ENST00000568249 801 ntBASIC3.14□□□□□ -1.91
PDX1P52945 MTND1P15-201ENST00000579262 949 ntBASIC3.14□□□□□ -1.91
PDX1P52945 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.14□□□□□ -1.91
PDX1P52945 AP001029.3-201ENST00000588063 596 ntBASIC3.14□□□□□ -1.91
PDX1P52945 KC877982.1-201ENST00000602313 470 ntBASIC3.14□□□□□ -1.91
PDX1P52945 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.14□□□□□ -1.91
PDX1P52945 AC011939.3-201ENST00000613686 466 ntBASIC3.14□□□□□ -1.91
PDX1P52945 ATP5A1P2-202ENST00000616464 443 ntBASIC3.14□□□□□ -1.91
PDX1P52945 AC139792.2-201ENST00000624218 587 ntBASIC3.14□□□□□ -1.91
PDX1P52945 AC048347.1-201ENST00000624621 427 ntBASIC3.14□□□□□ -1.91
PDX1P52945 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.14□□□□□ -1.91
PDX1P52945 AC110994.2-201ENST00000635481 492 ntBASIC3.14□□□□□ -1.91
PDX1P52945 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PDX1P52945 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.14□□□□□ -1.91
PDX1P52945 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PDX1P52945 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.14□□□□□ -1.91
PDX1P52945 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
PDX1P52945 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PDX1P52945 OR4G2P-202ENST00000641004 1759 ntBASIC3.13□□□□□ -1.91
PDX1P52945 AC005832.2-201ENST00000538921 1430 ntBASIC3.13□□□□□ -1.91
PDX1P52945 AF127577.6-201ENST00000623352 2191 ntBASIC3.13□□□□□ -1.91
PDX1P52945 RNU5A-1-201ENST00000362698 116 ntBASIC3.13□□□□□ -1.91
PDX1P52945 AC110754.1-201ENST00000399740 601 ntBASIC3.13□□□□□ -1.91
PDX1P52945 U3.42-201ENST00000408746 214 ntBASIC3.13□□□□□ -1.91
PDX1P52945 AC007899.1-201ENST00000412776 775 ntBASIC3.13□□□□□ -1.91
PDX1P52945 COTL1P1-201ENST00000422309 375 ntBASIC3.13□□□□□ -1.91
PDX1P52945 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.13□□□□□ -1.91
PDX1P52945 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PDX1P52945 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.13□□□□□ -1.91
PDX1P52945 AC140076.1-201ENST00000449897 361 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms