Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 AC016691.1-201ENST00000441321 413 ntBASIC3.34□□□□□ -1.87
RPL3P39023 DPPA3P1-201ENST00000448050 469 ntBASIC3.34□□□□□ -1.87
RPL3P39023 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.34□□□□□ -1.87
RPL3P39023 RPS24P6-201ENST00000452670 400 ntBASIC3.34□□□□□ -1.87
RPL3P39023 CACYBPP2-201ENST00000453625 678 ntBASIC3.34□□□□□ -1.87
RPL3P39023 snoU13.24-201ENST00000458998 104 ntBASIC3.34□□□□□ -1.87
RPL3P39023 AC007537.2-201ENST00000472093 511 ntBASIC3.34□□□□□ -1.87
RPL3P39023 RPL7P47-201ENST00000497299 556 ntBASIC3.34□□□□□ -1.87
RPL3P39023 AC026427.2-201ENST00000506228 536 ntBASIC3.34□□□□□ -1.87
RPL3P39023 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.34□□□□□ -1.87
RPL3P39023 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.34□□□□□ -1.87
RPL3P39023 AC107934.2-201ENST00000518653 310 ntBASIC3.34□□□□□ -1.87
RPL3P39023 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.34□□□□□ -1.87
RPL3P39023 HMGN1P28-201ENST00000521340 364 ntBASIC3.34□□□□□ -1.87
RPL3P39023 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RPL3P39023 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RPL3P39023 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.34□□□□□ -1.87
RPL3P39023 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.34□□□□□ -1.87
RPL3P39023 HMGB1P6-201ENST00000569046 646 ntBASIC3.34□□□□□ -1.87
RPL3P39023 AC005951.2-201ENST00000576282 495 ntBASIC3.34□□□□□ -1.87
RPL3P39023 AC006116.10-201ENST00000591836 581 ntBASIC3.34□□□□□ -1.87
RPL3P39023 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.34□□□□□ -1.87
RPL3P39023 RMST_8.1-201ENST00000610287 165 ntBASIC3.34□□□□□ -1.87
RPL3P39023 SNHG22-203ENST00000617833 660 ntBASIC3.34□□□□□ -1.87
RPL3P39023 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.34□□□□□ -1.87
RPL3P39023 MIR7153-201ENST00000637758 57 ntBASIC3.34□□□□□ -1.87
RPL3P39023 AL161912.2-201ENST00000565707 3007 ntBASIC3.34□□□□□ -1.88
RPL3P39023 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
RPL3P39023 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.34□□□□□ -1.88
RPL3P39023 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RPL3P39023 AC017071.1-201ENST00000564407 2204 ntBASIC3.34□□□□□ -1.88
RPL3P39023 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RPL3P39023 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.33□□□□□ -1.88
RPL3P39023 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RPL3P39023 RNU6-76P-201ENST00000384060 104 ntBASIC3.33□□□□□ -1.88
RPL3P39023 Y_RNA.481-201ENST00000384373 102 ntBASIC3.33□□□□□ -1.88
RPL3P39023 RN7SKP263-201ENST00000411194 309 ntBASIC3.33□□□□□ -1.88
RPL3P39023 MRPL50P2-201ENST00000416821 482 ntBASIC3.33□□□□□ -1.88
RPL3P39023 RPL30P16-201ENST00000419341 429 ntBASIC3.33□□□□□ -1.88
RPL3P39023 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPL3P39023 AP000907.1-201ENST00000428428 510 ntBASIC3.33□□□□□ -1.88
RPL3P39023 GTF2IP20-201ENST00000431663 360 ntBASIC3.33□□□□□ -1.88
RPL3P39023 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.33□□□□□ -1.88
RPL3P39023 CYCSP43-201ENST00000438233 310 ntBASIC3.33□□□□□ -1.88
RPL3P39023 HMGB3P12-201ENST00000438745 556 ntBASIC3.33□□□□□ -1.88
RPL3P39023 BNIP3P2-201ENST00000441221 577 ntBASIC3.33□□□□□ -1.88
RPL3P39023 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.33□□□□□ -1.88
RPL3P39023 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPL3P39023 SNRPGP5-201ENST00000456003 220 ntBASIC3.33□□□□□ -1.88
RPL3P39023 AP000873.1-201ENST00000463987 400 ntBASIC3.33□□□□□ -1.88
RPL3P39023 RPL31P58-201ENST00000469001 379 ntBASIC3.33□□□□□ -1.88
RPL3P39023 AC233702.1-201ENST00000482905 502 ntBASIC3.33□□□□□ -1.88
RPL3P39023 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.33□□□□□ -1.88
RPL3P39023 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.33□□□□□ -1.88
RPL3P39023 PRDX4P1-201ENST00000507189 574 ntBASIC3.33□□□□□ -1.88
RPL3P39023 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.33□□□□□ -1.88
RPL3P39023 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.33□□□□□ -1.88
RPL3P39023 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.33□□□□□ -1.88
RPL3P39023 RN7SKP18-201ENST00000516005 275 ntBASIC3.33□□□□□ -1.88
RPL3P39023 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.33□□□□□ -1.88
RPL3P39023 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.33□□□□□ -1.88
RPL3P39023 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.33□□□□□ -1.88
RPL3P39023 OR4R1P-201ENST00000529879 463 ntBASIC3.33□□□□□ -1.88
RPL3P39023 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.33□□□□□ -1.88
RPL3P39023 MTCO3P24-201ENST00000572729 782 ntBASIC3.33□□□□□ -1.88
RPL3P39023 AC024619.4-201ENST00000580924 316 ntBASIC3.33□□□□□ -1.88
RPL3P39023 AC008752.3-201ENST00000588113 712 ntBASIC3.33□□□□□ -1.88
RPL3P39023 AF038458.1-201ENST00000588406 262 ntBASIC3.33□□□□□ -1.88
RPL3P39023 AC006557.5-201ENST00000603126 811 ntBASIC3.33□□□□□ -1.88
RPL3P39023 AL035413.2-201ENST00000604801 525 ntBASIC3.33□□□□□ -1.88
RPL3P39023 AC012443.1-201ENST00000605605 231 ntBASIC3.33□□□□□ -1.88
RPL3P39023 FER-210ENST00000628534 558 ntTSL 5 BASIC3.33□□□□□ -1.88
RPL3P39023 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
RPL3P39023 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RPL3P39023 AL353746.1-201ENST00000566293 6881 ntBASIC3.33□□□□□ -1.88
RPL3P39023 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RPL3P39023 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.33□□□□□ -1.88
RPL3P39023 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.33□□□□□ -1.88
RPL3P39023 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RPL3P39023 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPL3P39023 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPL3P39023 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPL3P39023 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPL3P39023 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RPL3P39023 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RPL3P39023 RNU6-451P-201ENST00000362921 107 ntBASIC3.32□□□□□ -1.88
RPL3P39023 SMIM11P1-201ENST00000369586 178 ntBASIC3.32□□□□□ -1.88
RPL3P39023 SNORA69-201ENST00000383895 132 ntBASIC3.32□□□□□ -1.88
RPL3P39023 RNU6-606P-201ENST00000384721 111 ntBASIC3.32□□□□□ -1.88
RPL3P39023 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPL3P39023 AC114491.1-201ENST00000416095 246 ntBASIC3.32□□□□□ -1.88
RPL3P39023 RPL23AP82-202ENST00000427528 469 ntBASIC3.32□□□□□ -1.88
RPL3P39023 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.32□□□□□ -1.88
RPL3P39023 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.32□□□□□ -1.88
RPL3P39023 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.32□□□□□ -1.88
RPL3P39023 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.32□□□□□ -1.88
RPL3P39023 AC022364.2-201ENST00000457963 554 ntBASIC3.32□□□□□ -1.88
RPL3P39023 SNORD97-201ENST00000459187 142 ntBASIC3.32□□□□□ -1.88
RPL3P39023 CENPBD1P1-201ENST00000464061 469 ntBASIC3.32□□□□□ -1.88
RPL3P39023 MRPS17P3-201ENST00000465453 385 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms