Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.15□□□□□ -1.59
GPC1P35052 RNA5SP46-201ENST00000362370 120 ntBASIC5.15□□□□□ -1.59
GPC1P35052 RNU6-222P-201ENST00000362438 107 ntBASIC5.15□□□□□ -1.59
GPC1P35052 RNU6-428P-201ENST00000362942 107 ntBASIC5.15□□□□□ -1.59
GPC1P35052 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
GPC1P35052 RNU6-514P-201ENST00000384208 107 ntBASIC5.15□□□□□ -1.59
GPC1P35052 RNU6-178P-201ENST00000384631 104 ntBASIC5.15□□□□□ -1.59
GPC1P35052 RNU6-959P-201ENST00000384671 107 ntBASIC5.15□□□□□ -1.59
GPC1P35052 RNU6-882P-201ENST00000391025 103 ntBASIC5.15□□□□□ -1.59
GPC1P35052 RPL23AP36-201ENST00000413895 458 ntBASIC5.15□□□□□ -1.59
GPC1P35052 AL358453.1-201ENST00000422522 250 ntBASIC5.15□□□□□ -1.59
GPC1P35052 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
GPC1P35052 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
GPC1P35052 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.15□□□□□ -1.59
GPC1P35052 Y_RNA.638-201ENST00000459374 113 ntBASIC5.15□□□□□ -1.59
GPC1P35052 AL049830.2-201ENST00000480072 201 ntBASIC5.15□□□□□ -1.59
GPC1P35052 AC091912.1-201ENST00000511351 248 ntBASIC5.15□□□□□ -1.59
GPC1P35052 SNORD46.2-201ENST00000516021 102 ntBASIC5.15□□□□□ -1.59
GPC1P35052 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.15□□□□□ -1.59
GPC1P35052 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.15□□□□□ -1.59
GPC1P35052 BNIP3P5-201ENST00000562290 498 ntBASIC5.15□□□□□ -1.59
GPC1P35052 AC012616.1-201ENST00000600294 197 ntBASIC5.15□□□□□ -1.59
GPC1P35052 AC011921.3-201ENST00000605540 361 ntBASIC5.15□□□□□ -1.59
GPC1P35052 AC107294.1-201ENST00000609524 467 ntBASIC5.15□□□□□ -1.59
GPC1P35052 AC010632.3-201ENST00000611377 369 ntBASIC5.15□□□□□ -1.59
GPC1P35052 AC091895.1-201ENST00000624494 256 ntBASIC5.15□□□□□ -1.59
GPC1P35052 AC073869.8-201ENST00000641806 335 ntBASIC5.15□□□□□ -1.59
GPC1P35052 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
GPC1P35052 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.15□□□□□ -1.59
GPC1P35052 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.15□□□□□ -1.59
GPC1P35052 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GPC1P35052 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.14□□□□□ -1.59
GPC1P35052 OR13C1P-202ENST00000641378 2919 ntBASIC5.14□□□□□ -1.59
GPC1P35052 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.14□□□□□ -1.59
GPC1P35052 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GPC1P35052 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.14□□□□□ -1.59
GPC1P35052 RBBP8P1-201ENST00000449447 1844 ntBASIC5.14□□□□□ -1.59
GPC1P35052 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GPC1P35052 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.14□□□□□ -1.59
GPC1P35052 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.14□□□□□ -1.59
GPC1P35052 AC107027.3-201ENST00000565095 3473 ntBASIC5.14□□□□□ -1.59
GPC1P35052 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
GPC1P35052 RNU6-227P-201ENST00000362865 103 ntBASIC5.14□□□□□ -1.59
GPC1P35052 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.14□□□□□ -1.59
GPC1P35052 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.14□□□□□ -1.59
GPC1P35052 BMS1P22-201ENST00000414726 313 ntBASIC5.14□□□□□ -1.59
GPC1P35052 AL158156.1-201ENST00000422509 473 ntBASIC5.14□□□□□ -1.59
GPC1P35052 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.14□□□□□ -1.59
GPC1P35052 RPS29P14-201ENST00000431518 171 ntBASIC5.14□□□□□ -1.59
GPC1P35052 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.14□□□□□ -1.59
GPC1P35052 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.14□□□□□ -1.59
GPC1P35052 RPL36AP39-201ENST00000445859 318 ntBASIC5.14□□□□□ -1.59
GPC1P35052 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.14□□□□□ -1.59
GPC1P35052 AL450023.1-201ENST00000450868 751 ntBASIC5.14□□□□□ -1.59
GPC1P35052 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.14□□□□□ -1.59
GPC1P35052 AC010326.1-201ENST00000462726 602 ntBASIC5.14□□□□□ -1.59
GPC1P35052 RPS29P27-201ENST00000463711 170 ntBASIC5.14□□□□□ -1.59
GPC1P35052 RN7SL515P-201ENST00000463999 297 ntBASIC5.14□□□□□ -1.59
GPC1P35052 RNU6-1219P-201ENST00000516143 112 ntBASIC5.14□□□□□ -1.59
GPC1P35052 RNA5SP228-201ENST00000516232 133 ntBASIC5.14□□□□□ -1.59
GPC1P35052 SCARNA16.4-201ENST00000516956 187 ntBASIC5.14□□□□□ -1.59
GPC1P35052 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.14□□□□□ -1.59
GPC1P35052 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.14□□□□□ -1.59
GPC1P35052 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.14□□□□□ -1.59
GPC1P35052 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.14□□□□□ -1.59
GPC1P35052 AC008785.1-201ENST00000624475 456 ntBASIC5.14□□□□□ -1.59
GPC1P35052 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GPC1P35052 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
GPC1P35052 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GPC1P35052 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GPC1P35052 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GPC1P35052 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
GPC1P35052 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GPC1P35052 AC006206.1-201ENST00000544842 3387 ntBASIC5.14□□□□□ -1.59
GPC1P35052 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GPC1P35052 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GPC1P35052 AC008079.2-201ENST00000623543 20396 ntBASIC5.13□□□□□ -1.59
GPC1P35052 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.13□□□□□ -1.59
GPC1P35052 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
GPC1P35052 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
GPC1P35052 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.13□□□□□ -1.59
GPC1P35052 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GPC1P35052 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
GPC1P35052 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
GPC1P35052 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
GPC1P35052 MIR412-201ENST00000362142 91 ntBASIC5.13□□□□□ -1.59
GPC1P35052 RNA5SP52-201ENST00000362448 134 ntBASIC5.13□□□□□ -1.59
GPC1P35052 Y_RNA.82-201ENST00000363000 102 ntBASIC5.13□□□□□ -1.59
GPC1P35052 Y_RNA.92-201ENST00000363043 102 ntBASIC5.13□□□□□ -1.59
GPC1P35052 Y_RNA.235-201ENST00000364412 102 ntBASIC5.13□□□□□ -1.59
GPC1P35052 Y_RNA.275-201ENST00000364726 110 ntBASIC5.13□□□□□ -1.59
GPC1P35052 Y_RNA.306-201ENST00000365015 102 ntBASIC5.13□□□□□ -1.59
GPC1P35052 Y_RNA.308-201ENST00000365043 101 ntBASIC5.13□□□□□ -1.59
GPC1P35052 Y_RNA.312-201ENST00000365089 102 ntBASIC5.13□□□□□ -1.59
GPC1P35052 Y_RNA.322-201ENST00000365151 102 ntBASIC5.13□□□□□ -1.59
GPC1P35052 RNA5SP284-201ENST00000384547 118 ntBASIC5.13□□□□□ -1.59
GPC1P35052 SNORA22C-201ENST00000384614 134 ntBASIC5.13□□□□□ -1.59
GPC1P35052 RNU6-21P-201ENST00000384710 107 ntBASIC5.13□□□□□ -1.59
GPC1P35052 SNORA68.2-201ENST00000391263 128 ntBASIC5.13□□□□□ -1.59
GPC1P35052 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms