Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ATF4P18848 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ATF4P18848 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ATF4P18848 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.36□□□□□ -1.71
ATF4P18848 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.35□□□□□ -1.71
ATF4P18848 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.35□□□□□ -1.71
ATF4P18848 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ATF4P18848 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.35□□□□□ -1.71
ATF4P18848 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.35□□□□□ -1.71
ATF4P18848 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATF4P18848 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.35□□□□□ -1.71
ATF4P18848 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATF4P18848 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ATF4P18848 RPL9P7-201ENST00000330965 580 ntBASIC4.35□□□□□ -1.71
ATF4P18848 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
ATF4P18848 MIR130A-201ENST00000385274 89 ntBASIC4.35□□□□□ -1.71
ATF4P18848 SNORA75.6-201ENST00000391318 127 ntBASIC4.35□□□□□ -1.71
ATF4P18848 U3.37-201ENST00000408528 213 ntBASIC4.35□□□□□ -1.71
ATF4P18848 RN7SKP106-201ENST00000410832 272 ntBASIC4.35□□□□□ -1.71
ATF4P18848 RNU6-325P-201ENST00000411132 105 ntBASIC4.35□□□□□ -1.71
ATF4P18848 Z82205.1-201ENST00000428456 297 ntBASIC4.35□□□□□ -1.71
ATF4P18848 AL159987.2-201ENST00000432754 307 ntBASIC4.35□□□□□ -1.71
ATF4P18848 RPL35AP21-201ENST00000437667 333 ntBASIC4.35□□□□□ -1.71
ATF4P18848 AL513043.1-201ENST00000439124 535 ntBASIC4.35□□□□□ -1.71
ATF4P18848 HIGD1AP2-201ENST00000446367 280 ntBASIC4.35□□□□□ -1.71
ATF4P18848 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.35□□□□□ -1.71
ATF4P18848 HLA-DPA3-207ENST00000454398 229 ntBASIC4.35□□□□□ -1.71
ATF4P18848 RPL9P9-202ENST00000466501 579 ntBASIC4.35□□□□□ -1.71
ATF4P18848 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.35□□□□□ -1.71
ATF4P18848 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.35□□□□□ -1.71
ATF4P18848 RN7SL193P-201ENST00000491708 276 ntBASIC4.35□□□□□ -1.71
ATF4P18848 AK3P2-201ENST00000507976 429 ntBASIC4.35□□□□□ -1.71
ATF4P18848 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.35□□□□□ -1.71
ATF4P18848 RNA5SP73-201ENST00000516744 108 ntBASIC4.35□□□□□ -1.71
ATF4P18848 RNU6-928P-201ENST00000516876 104 ntBASIC4.35□□□□□ -1.71
ATF4P18848 AC010186.2-204ENST00000537668 439 ntBASIC4.35□□□□□ -1.71
ATF4P18848 TOMM20P2-201ENST00000540082 421 ntBASIC4.35□□□□□ -1.71
ATF4P18848 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.35□□□□□ -1.71
ATF4P18848 NDUFB4P11-201ENST00000560510 395 ntBASIC4.35□□□□□ -1.71
ATF4P18848 CYCSP39-201ENST00000565821 309 ntBASIC4.35□□□□□ -1.71
ATF4P18848 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.35□□□□□ -1.71
ATF4P18848 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.35□□□□□ -1.71
ATF4P18848 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.35□□□□□ -1.71
ATF4P18848 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.35□□□□□ -1.71
ATF4P18848 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
ATF4P18848 AC012468.1-201ENST00000604888 430 ntBASIC4.35□□□□□ -1.71
ATF4P18848 AC011890.2-201ENST00000613393 294 ntBASIC4.35□□□□□ -1.71
ATF4P18848 RMST_9.1-201ENST00000619945 193 ntBASIC4.35□□□□□ -1.71
ATF4P18848 AC092608.2-201ENST00000624427 218 ntBASIC4.35□□□□□ -1.71
ATF4P18848 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATF4P18848 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
ATF4P18848 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATF4P18848 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATF4P18848 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
ATF4P18848 ZNF137P-201ENST00000456718 1920 ntBASIC4.34□□□□□ -1.71
ATF4P18848 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATF4P18848 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ATF4P18848 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ATF4P18848 RNU1-150P-201ENST00000362491 162 ntBASIC4.34□□□□□ -1.71
ATF4P18848 RNA5SP502-201ENST00000362694 119 ntBASIC4.34□□□□□ -1.71
ATF4P18848 RNA5SP326-201ENST00000363209 110 ntBASIC4.34□□□□□ -1.71
ATF4P18848 Y_RNA.404-201ENST00000383978 102 ntBASIC4.34□□□□□ -1.71
ATF4P18848 RNU6-890P-201ENST00000384121 107 ntBASIC4.34□□□□□ -1.71
ATF4P18848 RNU6-72P-201ENST00000384285 79 ntBASIC4.34□□□□□ -1.71
ATF4P18848 Y_RNA.473-201ENST00000384333 102 ntBASIC4.34□□□□□ -1.71
ATF4P18848 HDGFP1-201ENST00000405943 252 ntBASIC4.34□□□□□ -1.71
ATF4P18848 AL513475.1-201ENST00000406602 315 ntBASIC4.34□□□□□ -1.71
ATF4P18848 RN7SKP16-201ENST00000410180 299 ntBASIC4.34□□□□□ -1.71
ATF4P18848 RNA5SP31-201ENST00000411144 127 ntBASIC4.34□□□□□ -1.71
ATF4P18848 AL354890.1-201ENST00000413730 346 ntBASIC4.34□□□□□ -1.71
ATF4P18848 AC093155.2-201ENST00000420734 937 ntBASIC4.34□□□□□ -1.71
ATF4P18848 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
ATF4P18848 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.34□□□□□ -1.71
ATF4P18848 AL161636.2-201ENST00000445179 927 ntBASIC4.34□□□□□ -1.71
ATF4P18848 MTND4P19-201ENST00000446659 478 ntBASIC4.34□□□□□ -1.71
ATF4P18848 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.34□□□□□ -1.71
ATF4P18848 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.34□□□□□ -1.71
ATF4P18848 RN7SL174P-201ENST00000475578 289 ntBASIC4.34□□□□□ -1.71
ATF4P18848 RPL32P34-201ENST00000486380 400 ntBASIC4.34□□□□□ -1.71
ATF4P18848 AC114801.2-201ENST00000503825 781 ntBASIC4.34□□□□□ -1.71
ATF4P18848 RNA5SP438-201ENST00000516561 112 ntBASIC4.34□□□□□ -1.71
ATF4P18848 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.34□□□□□ -1.71
ATF4P18848 AC006504.6-201ENST00000590142 199 ntBASIC4.34□□□□□ -1.71
ATF4P18848 AL139395.1-201ENST00000603662 160 ntBASIC4.34□□□□□ -1.71
ATF4P18848 AC109309.2-201ENST00000612597 332 ntBASIC4.34□□□□□ -1.71
ATF4P18848 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.34□□□□□ -1.71
ATF4P18848 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.34□□□□□ -1.71
ATF4P18848 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.34□□□□□ -1.71
ATF4P18848 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATF4P18848 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
ATF4P18848 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.34□□□□□ -1.72
ATF4P18848 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
ATF4P18848 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ATF4P18848 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
ATF4P18848 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ATF4P18848 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
ATF4P18848 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
ATF4P18848 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.33□□□□□ -1.72
ATF4P18848 MIR375-201ENST00000362103 64 ntBASIC4.33□□□□□ -1.72
ATF4P18848 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms