Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RNA5SP388-201ENST00000362584 119 ntBASIC5.14□□□□□ -1.59
HOXD8P13378 RNU6-817P-201ENST00000391083 104 ntBASIC5.14□□□□□ -1.59
HOXD8P13378 MIR1193-201ENST00000408109 78 ntBASIC5.14□□□□□ -1.59
HOXD8P13378 RPL23AP33-201ENST00000442301 452 ntBASIC5.14□□□□□ -1.59
HOXD8P13378 NUTF2P7-201ENST00000453086 375 ntBASIC5.14□□□□□ -1.59
HOXD8P13378 RPL23AP24-201ENST00000458203 385 ntBASIC5.14□□□□□ -1.59
HOXD8P13378 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXD8P13378 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXD8P13378 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXD8P13378 RNU6-138P-201ENST00000515952 107 ntBASIC5.14□□□□□ -1.59
HOXD8P13378 RNA5SP464-201ENST00000516251 108 ntBASIC5.14□□□□□ -1.59
HOXD8P13378 RNU6-789P-201ENST00000517105 102 ntBASIC5.14□□□□□ -1.59
HOXD8P13378 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.14□□□□□ -1.59
HOXD8P13378 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXD8P13378 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXD8P13378 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXD8P13378 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXD8P13378 AC009852.2-201ENST00000567898 485 ntBASIC5.14□□□□□ -1.59
HOXD8P13378 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXD8P13378 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXD8P13378 HMGB2P1-201ENST00000591146 634 ntBASIC5.14□□□□□ -1.59
HOXD8P13378 AC006363.1-201ENST00000603806 463 ntBASIC5.14□□□□□ -1.59
HOXD8P13378 SNORD39.4-201ENST00000620099 78 ntBASIC5.14□□□□□ -1.59
HOXD8P13378 SDR42E1P4-201ENST00000620894 481 ntBASIC5.14□□□□□ -1.59
HOXD8P13378 AL031601.2-202ENST00000622650 282 ntBASIC5.14□□□□□ -1.59
HOXD8P13378 AC011944.2-201ENST00000624440 683 ntBASIC5.14□□□□□ -1.59
HOXD8P13378 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXD8P13378 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
HOXD8P13378 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXD8P13378 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXD8P13378 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXD8P13378 AC005005.4-201ENST00000623789 16698 ntBASIC5.13□□□□□ -1.59
HOXD8P13378 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXD8P13378 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HOXD8P13378 Y_RNA.26-201ENST00000362539 101 ntBASIC5.13□□□□□ -1.59
HOXD8P13378 RNU6-806P-201ENST00000365147 105 ntBASIC5.13□□□□□ -1.59
HOXD8P13378 Y_RNA.478-201ENST00000384358 107 ntBASIC5.13□□□□□ -1.59
HOXD8P13378 AL030996.1-201ENST00000411430 235 ntBASIC5.13□□□□□ -1.59
HOXD8P13378 EIF4HP2-201ENST00000424380 563 ntBASIC5.13□□□□□ -1.59
HOXD8P13378 PIGPP3-201ENST00000425307 415 ntBASIC5.13□□□□□ -1.59
HOXD8P13378 RPS26P47-201ENST00000427219 348 ntBASIC5.13□□□□□ -1.59
HOXD8P13378 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD8P13378 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HOXD8P13378 AC093840.1-201ENST00000511599 336 ntBASIC5.13□□□□□ -1.59
HOXD8P13378 AC090517.1-201ENST00000569307 266 ntBASIC5.13□□□□□ -1.59
HOXD8P13378 MIR15A-201ENST00000607334 83 ntBASIC5.13□□□□□ -1.59
HOXD8P13378 AL591516.1-201ENST00000611326 274 ntBASIC5.13□□□□□ -1.59
HOXD8P13378 MIR1244-1-201ENST00000612829 85 ntBASIC5.13□□□□□ -1.59
HOXD8P13378 AL450472.3-201ENST00000615578 367 ntBASIC5.13□□□□□ -1.59
HOXD8P13378 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXD8P13378 MIR1244-3-201ENST00000635744 85 ntBASIC5.13□□□□□ -1.59
HOXD8P13378 MIR1244-2-201ENST00000636449 85 ntBASIC5.13□□□□□ -1.59
HOXD8P13378 MIR1244-4-202ENST00000636813 85 ntBASIC5.13□□□□□ -1.59
HOXD8P13378 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD8P13378 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXD8P13378 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD8P13378 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD8P13378 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD8P13378 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXD8P13378 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HOXD8P13378 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD8P13378 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD8P13378 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXD8P13378 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXD8P13378 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXD8P13378 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HOXD8P13378 THAP12P5-201ENST00000405864 2275 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXD8P13378 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HOXD8P13378 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXD8P13378 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXD8P13378 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
HOXD8P13378 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXD8P13378 RNU6-200P-201ENST00000364743 107 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXD8P13378 MIR135A2-201ENST00000384854 100 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 RNU6-1093P-201ENST00000391194 107 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 RNU6-174P-201ENST00000410406 106 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXD8P13378 AC004975.1-201ENST00000428733 208 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 RPL21P91-201ENST00000429231 479 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 AC092423.1-201ENST00000430165 186 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXD8P13378 ELOCP18-201ENST00000434209 337 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 ISCUP1-201ENST00000454451 448 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 AC010618.1-201ENST00000469924 477 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 TRBVB-201ENST00000477100 408 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
HOXD8P13378 FO393415.2-201ENST00000480085 343 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 AC025465.3-201ENST00000510570 311 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 MTND1P19-201ENST00000511780 315 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXD8P13378 RPL23AP87-202ENST00000573039 466 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 CYCSP40-201ENST00000575927 294 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 AC006272.2-201ENST00000594725 163 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 AC005344.1-201ENST00000613391 459 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 AC068724.3-201ENST00000625906 87 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXD8P13378 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
HOXD8P13378 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms