Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC087821.2-201ENST00000637086 450 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 AC006927.2-201ENST00000639256 389 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
COL4A2P08572 NUP58P1-201ENST00000502546 1738 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 RNU5B-1-201ENST00000363286 116 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 RNU6-236P-201ENST00000363886 106 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 RNU4-13P-201ENST00000364019 141 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 Y_RNA.540-201ENST00000384638 111 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 MIR217-201ENST00000384817 110 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 RNU6-1300P-201ENST00000391046 108 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.75□□□□□ -2.13
COL4A2P08572 MTCYBP32-201ENST00000427945 1084 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 EZH2P1-201ENST00000431167 291 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 NDUFA5P4-201ENST00000436704 385 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.75□□□□□ -2.13
COL4A2P08572 AL645638.1-201ENST00000440519 361 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.75□□□□□ -2.13
COL4A2P08572 AL096829.2-201ENST00000446582 742 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 Z73417.1-201ENST00000447373 778 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 AL589880.1-201ENST00000448271 287 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 MTND2P19-201ENST00000449129 1012 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 AC011753.1-201ENST00000451001 220 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 SSXP1-201ENST00000453640 473 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 AC096751.1-202ENST00000502691 1067 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 MTCYBP17-201ENST00000503579 789 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 COX7A2P2-201ENST00000505291 250 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.75□□□□□ -2.13
COL4A2P08572 AC010625.1-201ENST00000511296 403 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 AC117532.1-201ENST00000514638 323 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 RNU6-1095P-201ENST00000516148 108 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 RNU6-885P-201ENST00000516607 104 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 AP003355.1-201ENST00000518956 587 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.75□□□□□ -2.13
COL4A2P08572 ERHP1-201ENST00000523006 310 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 AC104417.1-201ENST00000523974 751 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 CR383656.7-201ENST00000548164 174 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.75□□□□□ -2.13
COL4A2P08572 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.75□□□□□ -2.13
COL4A2P08572 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.75□□□□□ -2.13
COL4A2P08572 DNAJC8P1-201ENST00000554535 372 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.75□□□□□ -2.13
COL4A2P08572 SULT1C2P1-202ENST00000562418 459 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 AC010546.1-201ENST00000569391 485 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 MIR4666A-201ENST00000580160 79 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.75□□□□□ -2.13
COL4A2P08572 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.75□□□□□ -2.13
COL4A2P08572 BNIP3P24-201ENST00000593398 557 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
COL4A2P08572 AC012669.1-201ENST00000603209 283 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 AP000238.1-201ENST00000608759 426 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 AC005332.6-201ENST00000613178 446 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 MIR6076-201ENST00000617521 113 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 AC010872.1-201ENST00000624225 675 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.75□□□□□ -2.13
COL4A2P08572 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.75□□□□□ -2.13
COL4A2P08572 HMGB1P5-201ENST00000255320 642 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 MIR518E-201ENST00000385252 88 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 FGF7P8-201ENST00000402994 292 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 RNU2-28P-201ENST00000410457 189 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 RN7SKP101-201ENST00000411376 320 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 AP000275.1-201ENST00000411943 390 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 RPS15AP38-201ENST00000413110 372 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 BEND7P1-201ENST00000422058 457 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 FO393414.1-201ENST00000428697 1184 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 AC092393.1-201ENST00000439625 742 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.74□□□□□ -2.13
COL4A2P08572 COX6CP18-201ENST00000448769 222 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A2P08572 USP9YP34-201ENST00000453983 808 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.74□□□□□ -2.13
COL4A2P08572 USP9YP10-201ENST00000454868 628 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 AMD1P1-201ENST00000457220 922 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
COL4A2P08572 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A2P08572 AC010460.2-201ENST00000509054 677 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 OR10V3P-201ENST00000525712 725 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A2P08572 MTND4LP25-201ENST00000570218 163 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 MTATP6P2-201ENST00000603319 678 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 AC106900.2-201ENST00000604994 317 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 AC008962.1-201ENST00000605729 304 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 AP005137.2-201ENST00000609238 400 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 AC091046.2-201ENST00000620775 665 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 AL360181.4-201ENST00000621752 134 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.74□□□□□ -2.13
COL4A2P08572 AC090897.3-201ENST00000636973 1157 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.74□□□□□ -2.13
COL4A2P08572 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL4A2P08572 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
COL4A2P08572 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL4A2P08572 HSPE1P11-201ENST00000339579 310 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 RNU5B-4P-201ENST00000363508 111 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.74□□□□□ -2.13
COL4A2P08572 AL139098.1-201ENST00000407291 389 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A2P08572 MTATP6P4-201ENST00000427725 675 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 PSMA6P3-201ENST00000428242 164 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 AL645568.3-201ENST00000433683 316 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 SEPT14P24-201ENST00000447236 180 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms