Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC022080.3-201ENST00000544433 482 ntBASIC2.16□□□□□ -2.06
CD74P04233 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.16□□□□□ -2.06
CD74P04233 PRELID2P1-201ENST00000552837 301 ntBASIC2.16□□□□□ -2.06
CD74P04233 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.16□□□□□ -2.06
CD74P04233 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.16□□□□□ -2.06
CD74P04233 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.16□□□□□ -2.06
CD74P04233 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.16□□□□□ -2.06
CD74P04233 MTND1P8-201ENST00000571424 950 ntBASIC2.16□□□□□ -2.06
CD74P04233 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.16□□□□□ -2.06
CD74P04233 AC022662.1-201ENST00000580252 331 ntBASIC2.16□□□□□ -2.06
CD74P04233 AC024933.1-201ENST00000608472 348 ntBASIC2.16□□□□□ -2.06
CD74P04233 AC004067.1-201ENST00000608733 700 ntBASIC2.16□□□□□ -2.06
CD74P04233 OR4G3P-201ENST00000633500 913 ntBASIC2.16□□□□□ -2.06
CD74P04233 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CD74P04233 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CD74P04233 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.16□□□□□ -2.06
CD74P04233 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.15□□□□□ -2.06
CD74P04233 AP000776.1-201ENST00000530032 1663 ntBASIC2.15□□□□□ -2.06
CD74P04233 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CD74P04233 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CD74P04233 SNORA80A-201ENST00000363922 136 ntBASIC2.15□□□□□ -2.07
CD74P04233 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.15□□□□□ -2.07
CD74P04233 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CD74P04233 Y_RNA.510-201ENST00000384511 114 ntBASIC2.15□□□□□ -2.07
CD74P04233 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CD74P04233 AL356421.1-201ENST00000403255 413 ntBASIC2.15□□□□□ -2.07
CD74P04233 SNORA11.2-201ENST00000408318 127 ntBASIC2.15□□□□□ -2.07
CD74P04233 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.15□□□□□ -2.07
CD74P04233 SSR1P2-201ENST00000415208 787 ntBASIC2.15□□□□□ -2.07
CD74P04233 MTCYBP38-201ENST00000417160 1123 ntBASIC2.15□□□□□ -2.07
CD74P04233 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.15□□□□□ -2.07
CD74P04233 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
CD74P04233 RPL35AP12-201ENST00000425362 338 ntBASIC2.15□□□□□ -2.07
CD74P04233 AC009414.1-201ENST00000427200 443 ntBASIC2.15□□□□□ -2.07
CD74P04233 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.15□□□□□ -2.07
CD74P04233 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.15□□□□□ -2.07
CD74P04233 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.15□□□□□ -2.07
CD74P04233 AL714022.1-201ENST00000439897 151 ntBASIC2.15□□□□□ -2.07
CD74P04233 AL445687.1-201ENST00000439946 251 ntBASIC2.15□□□□□ -2.07
CD74P04233 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.15□□□□□ -2.07
CD74P04233 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.15□□□□□ -2.07
CD74P04233 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.15□□□□□ -2.07
CD74P04233 AC233279.1-201ENST00000455300 423 ntBASIC2.15□□□□□ -2.07
CD74P04233 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.15□□□□□ -2.07
CD74P04233 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.15□□□□□ -2.07
CD74P04233 RPS29P26-201ENST00000477483 171 ntBASIC2.15□□□□□ -2.07
CD74P04233 AC116337.2-201ENST00000477662 156 ntBASIC2.15□□□□□ -2.07
CD74P04233 AC135721.1-201ENST00000497954 479 ntBASIC2.15□□□□□ -2.07
CD74P04233 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.15□□□□□ -2.07
CD74P04233 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.15□□□□□ -2.07
CD74P04233 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.15□□□□□ -2.07
CD74P04233 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.15□□□□□ -2.07
CD74P04233 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.15□□□□□ -2.07
CD74P04233 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.15□□□□□ -2.07
CD74P04233 AC022483.1-201ENST00000514020 567 ntBASIC2.15□□□□□ -2.07
CD74P04233 AC026801.2-201ENST00000515352 425 ntBASIC2.15□□□□□ -2.07
CD74P04233 AC087241.2-201ENST00000535801 324 ntBASIC2.15□□□□□ -2.07
CD74P04233 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CD74P04233 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.15□□□□□ -2.07
CD74P04233 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.15□□□□□ -2.07
CD74P04233 AL356280.1-201ENST00000603614 379 ntBASIC2.15□□□□□ -2.07
CD74P04233 AL645944.1-201ENST00000603857 493 ntBASIC2.15□□□□□ -2.07
CD74P04233 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.15□□□□□ -2.07
CD74P04233 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CD74P04233 AP000484.1-201ENST00000620067 1252 ntBASIC2.15□□□□□ -2.07
CD74P04233 AC002550.2-201ENST00000621246 394 ntBASIC2.15□□□□□ -2.07
CD74P04233 AC006386.2-201ENST00000624491 75 ntBASIC2.15□□□□□ -2.07
CD74P04233 AC012005.1-201ENST00000624575 75 ntBASIC2.15□□□□□ -2.07
CD74P04233 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.15□□□□□ -2.07
CD74P04233 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.15□□□□□ -2.07
CD74P04233 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.14□□□□□ -2.07
CD74P04233 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CD74P04233 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CD74P04233 AL139276.1-201ENST00000311910 1001 ntBASIC2.14□□□□□ -2.07
CD74P04233 AL161781.1-201ENST00000354277 403 ntBASIC2.14□□□□□ -2.07
CD74P04233 RNU1-112P-201ENST00000364401 164 ntBASIC2.14□□□□□ -2.07
CD74P04233 RNU6-7-201ENST00000364784 107 ntBASIC2.14□□□□□ -2.07
CD74P04233 RNU6-8-201ENST00000365467 107 ntBASIC2.14□□□□□ -2.07
CD74P04233 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CD74P04233 MIR144-201ENST00000384886 86 ntBASIC2.14□□□□□ -2.07
CD74P04233 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CD74P04233 RNU6-584P-201ENST00000410350 95 ntBASIC2.14□□□□□ -2.07
CD74P04233 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.14□□□□□ -2.07
CD74P04233 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.14□□□□□ -2.07
CD74P04233 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.14□□□□□ -2.07
CD74P04233 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.14□□□□□ -2.07
CD74P04233 AL139132.1-201ENST00000431587 344 ntBASIC2.14□□□□□ -2.07
CD74P04233 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.14□□□□□ -2.07
CD74P04233 AC011753.1-201ENST00000451001 220 ntBASIC2.14□□□□□ -2.07
CD74P04233 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.14□□□□□ -2.07
CD74P04233 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.14□□□□□ -2.07
CD74P04233 AL135752.1-201ENST00000479477 471 ntBASIC2.14□□□□□ -2.07
CD74P04233 MRPL42P6-201ENST00000486397 371 ntBASIC2.14□□□□□ -2.07
CD74P04233 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.14□□□□□ -2.07
CD74P04233 AC096576.1-201ENST00000489014 359 ntBASIC2.14□□□□□ -2.07
CD74P04233 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.14□□□□□ -2.07
CD74P04233 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.14□□□□□ -2.07
CD74P04233 MTCYBP43-201ENST00000513621 740 ntBASIC2.14□□□□□ -2.07
CD74P04233 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.14□□□□□ -2.07
CD74P04233 RNU6-798P-201ENST00000516912 103 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms