Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.63□□□□□ -2.31
APOBP04114 IGHVIII-38-1-201ENST00000521454 282 ntBASIC0.63□□□□□ -2.31
APOBP04114 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
APOBP04114 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
APOBP04114 AC009127.3-201ENST00000570531 403 ntBASIC0.63□□□□□ -2.31
APOBP04114 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.63□□□□□ -2.31
APOBP04114 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.63□□□□□ -2.31
APOBP04114 BZW1P2-201ENST00000473537 826 ntBASIC0.63□□□□□ -2.31
APOBP04114 RNU6-711P-201ENST00000517255 106 ntBASIC0.63□□□□□ -2.31
APOBP04114 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.63□□□□□ -2.31
APOBP04114 AC007275.1-201ENST00000621243 671 ntBASIC0.63□□□□□ -2.31
APOBP04114 Y_RNA.85-201ENST00000363014 111 ntBASIC0.63□□□□□ -2.31
APOBP04114 RNA5SP189-201ENST00000364920 115 ntBASIC0.63□□□□□ -2.31
APOBP04114 MIR1197-201ENST00000408818 88 ntBASIC0.63□□□□□ -2.31
APOBP04114 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.63□□□□□ -2.31
APOBP04114 OR6C7P-201ENST00000547875 934 ntBASIC0.63□□□□□ -2.31
APOBP04114 AC011468.4-201ENST00000603942 409 ntBASIC0.63□□□□□ -2.31
APOBP04114 SNORD14B-201ENST00000364533 90 ntBASIC0.62□□□□□ -2.31
APOBP04114 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.62□□□□□ -2.31
APOBP04114 IMMP1LP2-201ENST00000552954 492 ntBASIC0.62□□□□□ -2.31
APOBP04114 RNF6P1-201ENST00000444889 1784 ntBASIC0.62□□□□□ -2.31
APOBP04114 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
APOBP04114 RNU11-5P-201ENST00000391216 129 ntBASIC0.62□□□□□ -2.31
APOBP04114 MIR1285-1-201ENST00000408593 84 ntBASIC0.62□□□□□ -2.31
APOBP04114 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.62□□□□□ -2.31
APOBP04114 AL139109.1-201ENST00000455491 297 ntBASIC0.62□□□□□ -2.31
APOBP04114 AC026801.1-201ENST00000497178 464 ntBASIC0.62□□□□□ -2.31
APOBP04114 RNA5SP395-201ENST00000516567 118 ntBASIC0.62□□□□□ -2.31
APOBP04114 RNU4-60P-201ENST00000517239 135 ntBASIC0.62□□□□□ -2.31
APOBP04114 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.62□□□□□ -2.31
APOBP04114 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.62□□□□□ -2.31
APOBP04114 VN1R108P-201ENST00000431580 830 ntBASIC0.62□□□□□ -2.31
APOBP04114 AL121601.2-201ENST00000438019 707 ntBASIC0.62□□□□□ -2.31
APOBP04114 AC096772.1-201ENST00000609146 564 ntBASIC0.62□□□□□ -2.31
APOBP04114 AC092140.2-201ENST00000618027 521 ntBASIC0.62□□□□□ -2.31
APOBP04114 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
APOBP04114 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.62□□□□□ -2.31
APOBP04114 AC074117.2-201ENST00000417130 397 ntBASIC0.62□□□□□ -2.31
APOBP04114 RFESDP1-201ENST00000422350 461 ntBASIC0.62□□□□□ -2.31
APOBP04114 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.62□□□□□ -2.31
APOBP04114 SSXP4-201ENST00000451349 245 ntBASIC0.62□□□□□ -2.31
APOBP04114 FAM71BP1-201ENST00000604431 523 ntBASIC0.62□□□□□ -2.31
APOBP04114 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
APOBP04114 RNU6-234P-201ENST00000365229 104 ntBASIC0.61□□□□□ -2.31
APOBP04114 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
APOBP04114 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.61□□□□□ -2.31
APOBP04114 AC234064.1-201ENST00000436312 247 ntBASIC0.61□□□□□ -2.31
APOBP04114 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.61□□□□□ -2.31
APOBP04114 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.61□□□□□ -2.31
APOBP04114 AC092754.2-201ENST00000463506 460 ntBASIC0.61□□□□□ -2.31
APOBP04114 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
APOBP04114 AC010735.1-201ENST00000567305 1026 ntBASIC0.61□□□□□ -2.31
APOBP04114 UBE2L4-201ENST00000587688 464 ntBASIC0.61□□□□□ -2.31
APOBP04114 AC096720.1-201ENST00000604441 183 ntBASIC0.61□□□□□ -2.31
APOBP04114 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.61□□□□□ -2.31
APOBP04114 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.61□□□□□ -2.31
APOBP04114 RAB9AP5-201ENST00000437794 597 ntBASIC0.61□□□□□ -2.31
APOBP04114 RAB9AP2-201ENST00000443911 597 ntBASIC0.61□□□□□ -2.31
APOBP04114 KLRA1P-201ENST00000503499 986 ntBASIC0.61□□□□□ -2.31
APOBP04114 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.61□□□□□ -2.31
APOBP04114 AC036111.3-201ENST00000526389 112 ntBASIC0.61□□□□□ -2.31
APOBP04114 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.61□□□□□ -2.31
APOBP04114 HMGB1P24-202ENST00000615653 685 ntBASIC0.61□□□□□ -2.31
APOBP04114 AC121761.2-201ENST00000617300 689 ntBASIC0.61□□□□□ -2.31
APOBP04114 AL627230.5-201ENST00000619807 58 ntBASIC0.61□□□□□ -2.31
APOBP04114 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.61□□□□□ -2.31
APOBP04114 RNU6-799P-201ENST00000363567 107 ntBASIC0.61□□□□□ -2.31
APOBP04114 RNA5SP465-201ENST00000391195 109 ntBASIC0.61□□□□□ -2.31
APOBP04114 RNA5SP193-201ENST00000410353 107 ntBASIC0.61□□□□□ -2.31
APOBP04114 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.61□□□□□ -2.31
APOBP04114 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.61□□□□□ -2.31
APOBP04114 HMGB3P17-201ENST00000504195 649 ntBASIC0.61□□□□□ -2.31
APOBP04114 AC020699.1-201ENST00000505161 445 ntBASIC0.61□□□□□ -2.31
APOBP04114 RNA5SP108-201ENST00000605921 117 ntBASIC0.61□□□□□ -2.31
APOBP04114 AL157700.1-201ENST00000561973 1432 ntBASIC0.61□□□□□ -2.31
APOBP04114 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
APOBP04114 RNU6-670P-201ENST00000364312 104 ntBASIC0.6□□□□□ -2.31
APOBP04114 RNU6-198P-201ENST00000384258 104 ntBASIC0.6□□□□□ -2.31
APOBP04114 RNU2-40P-201ENST00000410833 196 ntBASIC0.6□□□□□ -2.31
APOBP04114 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.6□□□□□ -2.31
APOBP04114 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC0.6□□□□□ -2.31
APOBP04114 AC125611.2-201ENST00000551907 647 ntBASIC0.6□□□□□ -2.31
APOBP04114 SNORD84-203ENST00000584275 78 ntBASIC0.6□□□□□ -2.31
APOBP04114 SNORD114-21-201ENST00000606412 72 ntBASIC0.6□□□□□ -2.31
APOBP04114 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.6□□□□□ -2.31
APOBP04114 AL136520.1-201ENST00000600311 1322 ntBASIC0.6□□□□□ -2.31
APOBP04114 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
APOBP04114 AP000567.1-201ENST00000406413 156 ntBASIC0.6□□□□□ -2.31
APOBP04114 OR6C66P-201ENST00000414917 930 ntBASIC0.6□□□□□ -2.31
APOBP04114 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
APOBP04114 AC087343.1-201ENST00000477341 475 ntBASIC0.6□□□□□ -2.31
APOBP04114 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.6□□□□□ -2.31
APOBP04114 AP001180.3-201ENST00000582221 145 ntBASIC0.6□□□□□ -2.31
APOBP04114 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.6□□□□□ -2.31
APOBP04114 MTND4LP5-201ENST00000605152 292 ntBASIC0.6□□□□□ -2.31
APOBP04114 AC106028.5-201ENST00000610332 395 ntBASIC0.6□□□□□ -2.31
APOBP04114 ICE2P2-201ENST00000483823 2787 ntBASIC0.6□□□□□ -2.31
APOBP04114 AC012497.1-201ENST00000429392 575 ntBASIC0.6□□□□□ -2.31
APOBP04114 COX6CP18-201ENST00000448769 222 ntBASIC0.6□□□□□ -2.31
APOBP04114 HMGN2P13-201ENST00000476476 274 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms