Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 Y_RNA.527-201ENST00000384573 102 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 RNU6-1127P-201ENST00000384580 107 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 MIR450B-201ENST00000401182 78 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 LAP3P1-201ENST00000403648 294 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 RN7SKP267-201ENST00000410381 285 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 RN7SKP159-201ENST00000410657 292 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 AC093106.2-201ENST00000428212 385 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.22□□□□□ -1.73
CNOT4O95628 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.22□□□□□ -1.73
CNOT4O95628 RPL7P28-201ENST00000437739 740 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.22□□□□□ -1.73
CNOT4O95628 BTF3P6-201ENST00000448054 499 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 AL162151.2-201ENST00000448875 158 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.22□□□□□ -1.73
CNOT4O95628 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.22□□□□□ -1.73
CNOT4O95628 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.22□□□□□ -1.73
CNOT4O95628 AC116533.1-201ENST00000459748 321 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 AC010326.1-201ENST00000462726 602 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 RPS27AP1-201ENST00000475545 471 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.22□□□□□ -1.73
CNOT4O95628 AC097473.1-201ENST00000508142 408 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CNOT4O95628 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 AC103783.1-201ENST00000520506 373 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CNOT4O95628 RANP3-201ENST00000530970 276 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 AL110118.1-201ENST00000553543 400 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 AL161670.1-201ENST00000554348 137 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.22□□□□□ -1.73
CNOT4O95628 RN7SL690P-201ENST00000582087 240 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 AC012531.5-201ENST00000611375 151 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 AC007485.1-201ENST00000616755 206 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 PLCE1P1-201ENST00000622094 305 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CNOT4O95628 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CNOT4O95628 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CNOT4O95628 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CNOT4O95628 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.73
CNOT4O95628 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CNOT4O95628 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CNOT4O95628 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CNOT4O95628 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
CNOT4O95628 SNORD3E-201ENST00000362899 217 ntBASIC4.21□□□□□ -1.74
CNOT4O95628 UBBP2-201ENST00000376781 231 ntBASIC4.21□□□□□ -1.74
CNOT4O95628 AL109755.1-201ENST00000401791 649 ntBASIC4.21□□□□□ -1.74
CNOT4O95628 U3.35-201ENST00000408405 208 ntBASIC4.21□□□□□ -1.74
CNOT4O95628 RNU4-25P-201ENST00000410569 230 ntBASIC4.21□□□□□ -1.74
CNOT4O95628 HMGB3P2-201ENST00000411913 584 ntBASIC4.21□□□□□ -1.74
CNOT4O95628 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.21□□□□□ -1.74
CNOT4O95628 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CNOT4O95628 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.21□□□□□ -1.74
CNOT4O95628 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.21□□□□□ -1.74
CNOT4O95628 RPL12P25-201ENST00000455592 494 ntBASIC4.21□□□□□ -1.74
CNOT4O95628 CYCSP34-201ENST00000458172 304 ntBASIC4.21□□□□□ -1.74
CNOT4O95628 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.21□□□□□ -1.74
CNOT4O95628 MTND4LP22-201ENST00000508209 276 ntBASIC4.21□□□□□ -1.74
CNOT4O95628 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.21□□□□□ -1.74
CNOT4O95628 RNU6-685P-201ENST00000517088 95 ntBASIC4.21□□□□□ -1.74
CNOT4O95628 RN7SKP289-201ENST00000517244 295 ntBASIC4.21□□□□□ -1.74
CNOT4O95628 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.21□□□□□ -1.74
CNOT4O95628 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.21□□□□□ -1.74
CNOT4O95628 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.21□□□□□ -1.74
CNOT4O95628 ZNF192P1-203ENST00000565888 810 ntBASIC4.21□□□□□ -1.74
CNOT4O95628 AC106782.4-201ENST00000568264 210 ntBASIC4.21□□□□□ -1.74
CNOT4O95628 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.21□□□□□ -1.74
CNOT4O95628 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.21□□□□□ -1.74
CNOT4O95628 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.21□□□□□ -1.74
CNOT4O95628 AC073539.2-201ENST00000597113 165 ntBASIC4.21□□□□□ -1.74
CNOT4O95628 AC015967.1-201ENST00000619893 476 ntBASIC4.21□□□□□ -1.74
CNOT4O95628 AL162373.1-201ENST00000620433 407 ntBASIC4.21□□□□□ -1.74
CNOT4O95628 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.21□□□□□ -1.74
CNOT4O95628 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CNOT4O95628 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CNOT4O95628 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.21□□□□□ -1.74
CNOT4O95628 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
CNOT4O95628 MTND5P30-201ENST00000452896 1731 ntBASIC4.21□□□□□ -1.74
CNOT4O95628 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CNOT4O95628 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.2□□□□□ -1.74
CNOT4O95628 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
CNOT4O95628 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CNOT4O95628 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNOT4O95628 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNOT4O95628 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CNOT4O95628 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CNOT4O95628 RNU6-562P-201ENST00000362731 107 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 RNU6-1284P-201ENST00000363701 100 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 Y_RNA.176-201ENST00000363815 109 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 Y_RNA.188-201ENST00000363952 111 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 Y_RNA.252-201ENST00000364556 101 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNOT4O95628 Y_RNA.463-201ENST00000384271 102 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 RNU6-328P-201ENST00000390887 106 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 Z98745.1-201ENST00000402553 494 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNOT4O95628 BX682237.1-201ENST00000415016 335 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.2□□□□□ -1.74
CNOT4O95628 AL139095.3-201ENST00000419672 1203 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 RPL17P36-201ENST00000420302 549 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.2□□□□□ -1.74
CNOT4O95628 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms