Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
UPK1BO75841 NANOGNBP1-201ENST00000448444 480 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 RPL23AP7-203ENST00000449021 469 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 PDSS1P2-201ENST00000449397 678 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 MTND1P9-201ENST00000453775 944 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK1BO75841 AC233279.1-201ENST00000455300 423 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
UPK1BO75841 RBM43P1-201ENST00000476891 1081 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 RPS29P26-201ENST00000477483 171 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.02□□□□□ -2.09
UPK1BO75841 NDUFB4P2-201ENST00000509515 391 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 RNU6-390P-201ENST00000516259 103 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 SNORA31.18-201ENST00000517043 134 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 RNA5SP290-201ENST00000517133 127 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 HMGN1P28-201ENST00000521340 364 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.02□□□□□ -2.09
UPK1BO75841 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.02□□□□□ -2.09
UPK1BO75841 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.02□□□□□ -2.09
UPK1BO75841 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK1BO75841 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
UPK1BO75841 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK1BO75841 AP000403.1-201ENST00000603349 851 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 AC004987.4-201ENST00000603383 338 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 AC021749.1-201ENST00000604322 607 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK1BO75841 AC039056.2-201ENST00000622261 511 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.02□□□□□ -2.09
UPK1BO75841 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.02□□□□□ -2.09
UPK1BO75841 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
UPK1BO75841 ZNF833P-201ENST00000424938 1494 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.01□□□□□ -2.09
UPK1BO75841 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.01□□□□□ -2.09
UPK1BO75841 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
UPK1BO75841 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.01□□□□□ -2.09
UPK1BO75841 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
UPK1BO75841 RNA5SP479-201ENST00000364858 117 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 Y_RNA.311-201ENST00000365068 96 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 RNU6-413P-201ENST00000384115 107 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 RNU6-750P-201ENST00000390946 107 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.01□□□□□ -2.09
UPK1BO75841 AL591416.1-201ENST00000404015 867 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
UPK1BO75841 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.01□□□□□ -2.09
UPK1BO75841 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.01□□□□□ -2.09
UPK1BO75841 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.01□□□□□ -2.09
UPK1BO75841 AC005326.1-201ENST00000429197 123 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.01□□□□□ -2.09
UPK1BO75841 MTATP6P30-201ENST00000443540 664 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 TPT1P14-201ENST00000448018 505 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 MRPL42P6-201ENST00000486397 371 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 AL160314.1-201ENST00000490836 438 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 AC006499.5-201ENST00000505037 514 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.01□□□□□ -2.09
UPK1BO75841 AC096571.1-202ENST00000506634 735 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.01□□□□□ -2.09
UPK1BO75841 AC008413.1-201ENST00000511864 177 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 AC024589.1-201ENST00000512207 263 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.01□□□□□ -2.09
UPK1BO75841 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.01□□□□□ -2.09
UPK1BO75841 RNU5F-8P-201ENST00000515941 111 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 SCARNA11.3-201ENST00000517276 130 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 AC023632.4-201ENST00000517783 191 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 AC023538.1-201ENST00000534576 736 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.01□□□□□ -2.09
UPK1BO75841 AL359212.1-201ENST00000556608 614 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 AC105137.2-201ENST00000569073 466 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
UPK1BO75841 OR4K7P-201ENST00000580232 945 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.01□□□□□ -2.09
UPK1BO75841 UBE2L4-201ENST00000587688 464 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 ATP1B3P1-201ENST00000605365 821 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 AC004805.2-201ENST00000605382 482 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.01□□□□□ -2.09
UPK1BO75841 AL158801.5-201ENST00000623123 465 ntBASIC2.01□□□□□ -2.09
UPK1BO75841 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
UPK1BO75841 AL109809.4-201ENST00000603520 2185 ntBASIC2□□□□□ -2.09
UPK1BO75841 AC004520.1-201ENST00000608362 1413 ntBASIC2□□□□□ -2.09
UPK1BO75841 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2□□□□□ -2.09
UPK1BO75841 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2□□□□□ -2.09
UPK1BO75841 AC092447.10-201ENST00000620607 1652 ntBASIC2□□□□□ -2.09
UPK1BO75841 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
UPK1BO75841 RNU6-220P-201ENST00000390919 107 ntBASIC2□□□□□ -2.09
UPK1BO75841 PTMAP2-201ENST00000397627 327 ntBASIC2□□□□□ -2.09
UPK1BO75841 MTND1P21-201ENST00000412991 285 ntBASIC2□□□□□ -2.09
UPK1BO75841 USP9YP13-201ENST00000417797 480 ntBASIC2□□□□□ -2.09
UPK1BO75841 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2□□□□□ -2.09
UPK1BO75841 BPY2DP-201ENST00000422208 265 ntBASIC2□□□□□ -2.09
UPK1BO75841 MED14P1-201ENST00000430517 648 ntBASIC2□□□□□ -2.09
UPK1BO75841 USP12PX-201ENST00000432383 1057 ntBASIC2□□□□□ -2.09
UPK1BO75841 SNRPEP9-201ENST00000436794 238 ntBASIC2□□□□□ -2.09
UPK1BO75841 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2□□□□□ -2.09
UPK1BO75841 COX6CP12-201ENST00000446748 202 ntBASIC2□□□□□ -2.09
UPK1BO75841 AL021397.1-201ENST00000451806 248 ntBASIC2□□□□□ -2.09
UPK1BO75841 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2□□□□□ -2.09
UPK1BO75841 CECR9-201ENST00000453421 199 ntBASIC2□□□□□ -2.09
UPK1BO75841 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2□□□□□ -2.09
UPK1BO75841 AC025033.1-201ENST00000463883 194 ntBASIC2□□□□□ -2.09
UPK1BO75841 RN7SL542P-201ENST00000467147 294 ntBASIC2□□□□□ -2.09
UPK1BO75841 RPS27AP10-201ENST00000496103 208 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms