Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC034229.5-201ENST00000624258 185 ntBASIC5.62□□□□□ -1.51
PTCD1O75127 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.62□□□□□ -1.51
PTCD1O75127 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.62□□□□□ -1.51
PTCD1O75127 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
PTCD1O75127 MTND5P30-201ENST00000452896 1731 ntBASIC5.62□□□□□ -1.51
PTCD1O75127 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCD1O75127 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCD1O75127 PNPT1P2-201ENST00000456768 2050 ntBASIC5.62□□□□□ -1.51
PTCD1O75127 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.62□□□□□ -1.51
PTCD1O75127 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.61□□□□□ -1.51
PTCD1O75127 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTCD1O75127 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTCD1O75127 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTCD1O75127 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.61□□□□□ -1.51
PTCD1O75127 Y_RNA.364-201ENST00000365532 101 ntBASIC5.61□□□□□ -1.51
PTCD1O75127 Y_RNA.447-201ENST00000384184 113 ntBASIC5.61□□□□□ -1.51
PTCD1O75127 Y_RNA.473-201ENST00000384333 102 ntBASIC5.61□□□□□ -1.51
PTCD1O75127 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTCD1O75127 AL583834.1-201ENST00000406943 343 ntBASIC5.61□□□□□ -1.51
PTCD1O75127 MIR548M-201ENST00000408260 86 ntBASIC5.61□□□□□ -1.51
PTCD1O75127 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.61□□□□□ -1.51
PTCD1O75127 ATG3P1-201ENST00000419507 911 ntBASIC5.61□□□□□ -1.51
PTCD1O75127 OR2AH1P-201ENST00000425717 928 ntBASIC5.61□□□□□ -1.51
PTCD1O75127 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.61□□□□□ -1.51
PTCD1O75127 RPL35AP15-201ENST00000468042 339 ntBASIC5.61□□□□□ -1.51
PTCD1O75127 AC034236.1-201ENST00000469891 373 ntBASIC5.61□□□□□ -1.51
PTCD1O75127 AC117503.1-201ENST00000472241 394 ntBASIC5.61□□□□□ -1.51
PTCD1O75127 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTCD1O75127 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.61□□□□□ -1.51
PTCD1O75127 RNU6-677P-201ENST00000516914 101 ntBASIC5.61□□□□□ -1.51
PTCD1O75127 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.61□□□□□ -1.51
PTCD1O75127 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.61□□□□□ -1.51
PTCD1O75127 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.61□□□□□ -1.51
PTCD1O75127 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.61□□□□□ -1.51
PTCD1O75127 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.61□□□□□ -1.51
PTCD1O75127 AC126177.3-201ENST00000551839 688 ntBASIC5.61□□□□□ -1.51
PTCD1O75127 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.61□□□□□ -1.51
PTCD1O75127 MTCO3P23-201ENST00000561363 289 ntBASIC5.61□□□□□ -1.51
PTCD1O75127 AC113195.1-201ENST00000579952 141 ntBASIC5.61□□□□□ -1.51
PTCD1O75127 PRR13P7-201ENST00000605538 430 ntBASIC5.61□□□□□ -1.51
PTCD1O75127 AC009229.3-201ENST00000608056 282 ntBASIC5.61□□□□□ -1.51
PTCD1O75127 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTCD1O75127 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PTCD1O75127 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTCD1O75127 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.61□□□□□ -1.51
PTCD1O75127 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PTCD1O75127 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTCD1O75127 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCD1O75127 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCD1O75127 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.6□□□□□ -1.51
PTCD1O75127 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTCD1O75127 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCD1O75127 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.6□□□□□ -1.51
PTCD1O75127 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCD1O75127 SNORD3E-201ENST00000362899 217 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 RNU6-1155P-201ENST00000363554 107 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 RNA5SP130-201ENST00000364431 114 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 Y_RNA.396-201ENST00000383949 103 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 RNU6-128P-201ENST00000383976 107 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCD1O75127 RNU6-712P-201ENST00000410558 100 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 AC080125.1-201ENST00000414888 684 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.6□□□□□ -1.51
PTCD1O75127 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCD1O75127 AL157831.1-201ENST00000426134 473 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCD1O75127 COX6B1P7-201ENST00000430845 235 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 AL590399.6-201ENST00000446396 307 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 AL162151.2-201ENST00000448875 158 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 RPS11P1-201ENST00000451072 473 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 RN7SL132P-201ENST00000478131 296 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCD1O75127 SNORA67.7-201ENST00000516664 135 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 Y_RNA.708-201ENST00000516950 96 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 RN7SKP60-201ENST00000516985 239 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 RNU6-789P-201ENST00000517105 102 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.6□□□□□ -1.51
PTCD1O75127 AC067852.3-201ENST00000589177 561 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 MIR6875-201ENST00000617506 72 ntBASIC5.6□□□□□ -1.51
PTCD1O75127 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCD1O75127 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCD1O75127 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCD1O75127 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.59□□□□□ -1.51
PTCD1O75127 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTCD1O75127 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTCD1O75127 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTCD1O75127 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.59□□□□□ -1.51
PTCD1O75127 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.59□□□□□ -1.51
PTCD1O75127 HSPA8P4-201ENST00000511877 1920 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 RNU1-14P-201ENST00000362759 152 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 RNU1-63P-201ENST00000383902 164 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 RNY1P14-201ENST00000384426 108 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 RNA5SP171-201ENST00000391071 115 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 Y_RNA.645-201ENST00000391229 102 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 RNU2-43P-201ENST00000410306 190 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 AC009237.10-201ENST00000414112 510 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.59□□□□□ -1.51
PTCD1O75127 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.59□□□□□ -1.51
PTCD1O75127 DPH3P2-201ENST00000422618 250 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 RPL23AP69-201ENST00000431134 458 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms