Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.81□□□□□ -1.96
SDC3O75056 MTND5P4-201ENST00000514978 288 ntBASIC2.81□□□□□ -1.96
SDC3O75056 SCARNA15.2-201ENST00000516409 127 ntBASIC2.81□□□□□ -1.96
SDC3O75056 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.81□□□□□ -1.96
SDC3O75056 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.81□□□□□ -1.96
SDC3O75056 AC009094.1-201ENST00000564443 426 ntBASIC2.81□□□□□ -1.96
SDC3O75056 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.81□□□□□ -1.96
SDC3O75056 AC008751.2-201ENST00000597885 980 ntBASIC2.81□□□□□ -1.96
SDC3O75056 AP000811.1-201ENST00000603803 651 ntBASIC2.81□□□□□ -1.96
SDC3O75056 BCRP9-201ENST00000605312 388 ntBASIC2.81□□□□□ -1.96
SDC3O75056 AC116312.1-201ENST00000606841 314 ntBASIC2.81□□□□□ -1.96
SDC3O75056 AC131902.3-201ENST00000611767 581 ntBASIC2.81□□□□□ -1.96
SDC3O75056 AL603758.1-201ENST00000618654 241 ntBASIC2.81□□□□□ -1.96
SDC3O75056 AL031667.3-201ENST00000620124 655 ntBASIC2.81□□□□□ -1.96
SDC3O75056 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.81□□□□□ -1.96
SDC3O75056 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.81□□□□□ -1.96
SDC3O75056 LRRC77P-213ENST00000637727 880 ntBASIC2.81□□□□□ -1.96
SDC3O75056 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
SDC3O75056 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.81□□□□□ -1.96
SDC3O75056 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SDC3O75056 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SDC3O75056 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.8□□□□□ -1.96
SDC3O75056 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SDC3O75056 MTND5P33-201ENST00000571250 1450 ntBASIC2.8□□□□□ -1.96
SDC3O75056 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.8□□□□□ -1.96
SDC3O75056 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
SDC3O75056 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SDC3O75056 RNU4-82P-201ENST00000362443 140 ntBASIC2.8□□□□□ -1.96
SDC3O75056 Y_RNA.18-201ENST00000362461 102 ntBASIC2.8□□□□□ -1.96
SDC3O75056 Y_RNA.302-201ENST00000364997 102 ntBASIC2.8□□□□□ -1.96
SDC3O75056 RNU6-769P-201ENST00000384407 104 ntBASIC2.8□□□□□ -1.96
SDC3O75056 SNORA46-201ENST00000384762 135 ntBASIC2.8□□□□□ -1.96
SDC3O75056 AL590084.2-201ENST00000401481 382 ntBASIC2.8□□□□□ -1.96
SDC3O75056 RPL23AP39-201ENST00000415533 405 ntBASIC2.8□□□□□ -1.96
SDC3O75056 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.8□□□□□ -1.96
SDC3O75056 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.8□□□□□ -1.96
SDC3O75056 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.8□□□□□ -1.96
SDC3O75056 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.8□□□□□ -1.96
SDC3O75056 AC063976.3-201ENST00000426849 329 ntBASIC2.8□□□□□ -1.96
SDC3O75056 SAR1AP4-201ENST00000429225 591 ntBASIC2.8□□□□□ -1.96
SDC3O75056 MTND1P20-201ENST00000430341 950 ntBASIC2.8□□□□□ -1.96
SDC3O75056 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.8□□□□□ -1.96
SDC3O75056 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.8□□□□□ -1.96
SDC3O75056 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.8□□□□□ -1.96
SDC3O75056 MTND4LP3-201ENST00000468320 276 ntBASIC2.8□□□□□ -1.96
SDC3O75056 SNORA31.21-201ENST00000517180 77 ntBASIC2.8□□□□□ -1.96
SDC3O75056 AP004247.1-201ENST00000531556 1289 ntBASIC2.8□□□□□ -1.96
SDC3O75056 ELOCP32-201ENST00000548625 324 ntBASIC2.8□□□□□ -1.96
SDC3O75056 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.8□□□□□ -1.96
SDC3O75056 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.8□□□□□ -1.96
SDC3O75056 RPL23AP84-201ENST00000571193 464 ntBASIC2.8□□□□□ -1.96
SDC3O75056 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.8□□□□□ -1.96
SDC3O75056 MIR544B-201ENST00000582372 78 ntBASIC2.8□□□□□ -1.96
SDC3O75056 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.8□□□□□ -1.96
SDC3O75056 U73023.1-201ENST00000603134 700 ntBASIC2.8□□□□□ -1.96
SDC3O75056 AC013412.1-201ENST00000610687 192 ntBASIC2.8□□□□□ -1.96
SDC3O75056 AC073308.1-201ENST00000623696 305 ntBASIC2.8□□□□□ -1.96
SDC3O75056 AC090617.7-201ENST00000623952 126 ntBASIC2.8□□□□□ -1.96
SDC3O75056 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SDC3O75056 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SDC3O75056 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.8□□□□□ -1.96
SDC3O75056 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.8□□□□□ -1.96
SDC3O75056 AC108206.1-201ENST00000570186 4159 ntBASIC2.8□□□□□ -1.96
SDC3O75056 GABRG2-229ENST00000641017 3628 ntBASIC2.8□□□□□ -1.96
SDC3O75056 DDX10P1-201ENST00000448545 1933 ntBASIC2.8□□□□□ -1.96
SDC3O75056 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.79□□□□□ -1.96
SDC3O75056 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SDC3O75056 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.79□□□□□ -1.96
SDC3O75056 RNU6-253P-201ENST00000384730 105 ntBASIC2.79□□□□□ -1.96
SDC3O75056 RNU6-516P-201ENST00000411381 104 ntBASIC2.79□□□□□ -1.96
SDC3O75056 RAP1BP1-201ENST00000412709 553 ntBASIC2.79□□□□□ -1.96
SDC3O75056 AC245054.2-201ENST00000415639 319 ntBASIC2.79□□□□□ -1.96
SDC3O75056 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.79□□□□□ -1.96
SDC3O75056 AL390023.1-201ENST00000428836 262 ntBASIC2.79□□□□□ -1.96
SDC3O75056 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.79□□□□□ -1.96
SDC3O75056 ARL5AP4-201ENST00000430731 512 ntBASIC2.79□□□□□ -1.96
SDC3O75056 RPL35AP22-201ENST00000436855 335 ntBASIC2.79□□□□□ -1.96
SDC3O75056 FAM103A2P-201ENST00000444122 354 ntBASIC2.79□□□□□ -1.96
SDC3O75056 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.79□□□□□ -1.96
SDC3O75056 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.79□□□□□ -1.96
SDC3O75056 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.79□□□□□ -1.96
SDC3O75056 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.79□□□□□ -1.96
SDC3O75056 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.79□□□□□ -1.96
SDC3O75056 HMGN1P28-201ENST00000521340 364 ntBASIC2.79□□□□□ -1.96
SDC3O75056 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
SDC3O75056 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.79□□□□□ -1.96
SDC3O75056 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.79□□□□□ -1.96
SDC3O75056 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.79□□□□□ -1.96
SDC3O75056 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.79□□□□□ -1.96
SDC3O75056 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.79□□□□□ -1.96
SDC3O75056 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.79□□□□□ -1.96
SDC3O75056 DUXAP4-201ENST00000603046 613 ntBASIC2.79□□□□□ -1.96
SDC3O75056 AC112187.2-201ENST00000604345 283 ntBASIC2.79□□□□□ -1.96
SDC3O75056 AC019226.1-201ENST00000625666 515 ntBASIC2.79□□□□□ -1.96
SDC3O75056 AC110079.1-202ENST00000635213 138 ntBASIC2.79□□□□□ -1.96
SDC3O75056 AC092435.3-201ENST00000565538 3654 ntBASIC2.79□□□□□ -1.96
SDC3O75056 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.79□□□□□ -1.96
SDC3O75056 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SDC3O75056 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.79□□□□□ -1.96
SDC3O75056 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 206.2 ms