Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.21□□□□□ -2.06
SHOX2O60902 GLYCAM1-201ENST00000546596 285 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.21□□□□□ -2.06
SHOX2O60902 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.21□□□□□ -2.06
SHOX2O60902 AC068135.2-201ENST00000569293 1028 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.21□□□□□ -2.06
SHOX2O60902 AC013553.2-201ENST00000604244 589 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 AC006213.4-201ENST00000616184 634 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 MIR6130-201ENST00000619419 109 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 DUXAP9-208ENST00000622815 614 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 HPVC1-201ENST00000629899 1198 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.21□□□□□ -2.06
SHOX2O60902 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
SHOX2O60902 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.21□□□□□ -2.06
SHOX2O60902 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 AL137003.2-201ENST00000606924 2538 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SHOX2O60902 RNU6-1300P-201ENST00000391046 108 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 RNU2-40P-201ENST00000410833 196 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 AC005005.2-201ENST00000420779 380 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 FAM204CP-201ENST00000424489 642 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SHOX2O60902 BMI1P1-201ENST00000445879 941 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 MTCYBP11-201ENST00000447254 1109 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.2□□□□□ -2.06
SHOX2O60902 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.2□□□□□ -2.06
SHOX2O60902 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SHOX2O60902 snoU13.18-201ENST00000459483 104 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 AC026410.2-201ENST00000460281 156 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.2□□□□□ -2.06
SHOX2O60902 AC109486.1-201ENST00000486833 374 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 RPS29P21-201ENST00000496272 170 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.2□□□□□ -2.06
SHOX2O60902 AC114322.1-201ENST00000506771 926 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 RNU6-1053P-201ENST00000515930 101 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 RNA5SP364-201ENST00000516938 78 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.2□□□□□ -2.06
SHOX2O60902 AP001189.2-201ENST00000527320 189 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.2□□□□□ -2.06
SHOX2O60902 AC124947.2-202ENST00000552735 133 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 TRAV28-201ENST00000557548 323 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 MIR3616-201ENST00000584070 92 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.2□□□□□ -2.06
SHOX2O60902 AC093875.1-201ENST00000623688 504 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.2□□□□□ -2.06
SHOX2O60902 MIR4275-201ENST00000636486 87 ntBASIC2.2□□□□□ -2.06
SHOX2O60902 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.2□□□□□ -2.06
SHOX2O60902 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
SHOX2O60902 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SHOX2O60902 KPNA2P1-201ENST00000458289 1591 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 U3.12-201ENST00000364498 214 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 RNU6-14P-201ENST00000384630 106 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 RNU6-1072P-201ENST00000384703 107 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 RNU6-443P-201ENST00000384780 107 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 MIR196B-201ENST00000384852 84 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 AL030996.1-201ENST00000411430 235 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 AC027644.1-201ENST00000419595 298 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 AC099548.1-201ENST00000421443 426 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.19□□□□□ -2.06
SHOX2O60902 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.19□□□□□ -2.06
SHOX2O60902 RPL17P35-201ENST00000432217 549 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 UBE2V1P13-201ENST00000436983 439 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.19□□□□□ -2.06
SHOX2O60902 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.19□□□□□ -2.06
SHOX2O60902 MOB1AP2-201ENST00000446060 614 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.19□□□□□ -2.06
SHOX2O60902 AC233279.1-201ENST00000455300 423 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 AL135752.1-201ENST00000479477 471 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.19□□□□□ -2.06
SHOX2O60902 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.19□□□□□ -2.06
SHOX2O60902 AC108729.3-201ENST00000513484 108 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.19□□□□□ -2.06
SHOX2O60902 SNORA31.18-201ENST00000517043 134 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 AC109329.2-201ENST00000519658 482 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.19□□□□□ -2.06
SHOX2O60902 COX6CP5-201ENST00000527162 228 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 AC125611.1-201ENST00000549563 229 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.19□□□□□ -2.06
SHOX2O60902 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.19□□□□□ -2.06
SHOX2O60902 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.19□□□□□ -2.06
SHOX2O60902 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.19□□□□□ -2.06
SHOX2O60902 MIR3117-201ENST00000584034 78 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.19□□□□□ -2.06
SHOX2O60902 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.19□□□□□ -2.06
SHOX2O60902 AC098657.3-201ENST00000620434 263 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 AC243829.7-201ENST00000633081 225 ntBASIC2.19□□□□□ -2.06
SHOX2O60902 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SHOX2O60902 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SHOX2O60902 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SHOX2O60902 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SHOX2O60902 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SHOX2O60902 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
SHOX2O60902 AL161781.1-201ENST00000354277 403 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 Y_RNA.116-201ENST00000363292 103 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 U3.20-201ENST00000390909 217 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 SNORA48.3-201ENST00000391081 134 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SHOX2O60902 RPL23AP36-201ENST00000413895 458 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 MTATP6P27-201ENST00000416987 621 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 AC007742.1-201ENST00000425789 329 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms