Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 CCDC58P2-201ENST00000417131 366 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.44□□□□□ -2.02
CHMP2AO43633 ARF4P4-201ENST00000439608 520 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 AL049734.2-201ENST00000441066 616 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.44□□□□□ -2.02
CHMP2AO43633 AC107626.1-201ENST00000471084 183 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 AC104090.1-201ENST00000506341 1171 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.44□□□□□ -2.02
CHMP2AO43633 SCARNA17.1-201ENST00000516211 143 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 SCARNA17.2-201ENST00000516334 143 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 SCARNA15.2-201ENST00000516409 127 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 AL391261.3-201ENST00000557194 520 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 MYL12BP1-201ENST00000569826 507 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 MTND4LP25-201ENST00000570218 163 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 SCARNA17.4-201ENST00000614296 143 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 AC010378.1-201ENST00000619270 362 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 MIR6130-201ENST00000619419 109 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 AC126544.2-201ENST00000625174 749 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 AC087821.2-201ENST00000637086 450 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.44□□□□□ -2.02
CHMP2AO43633 PABPC1P9-201ENST00000426076 1612 ntBASIC2.43□□□□□ -2.02
CHMP2AO43633 SNORA67.1-201ENST00000364749 141 ntBASIC2.43□□□□□ -2.02
CHMP2AO43633 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CHMP2AO43633 AL079342.2-201ENST00000403367 482 ntBASIC2.43□□□□□ -2.02
CHMP2AO43633 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.43□□□□□ -2.02
CHMP2AO43633 RN7SKP192-201ENST00000411291 327 ntBASIC2.43□□□□□ -2.02
CHMP2AO43633 MTATP6P27-201ENST00000416987 621 ntBASIC2.43□□□□□ -2.02
CHMP2AO43633 NPM1P11-201ENST00000417106 855 ntBASIC2.43□□□□□ -2.02
CHMP2AO43633 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.43□□□□□ -2.02
CHMP2AO43633 MTCO3P30-201ENST00000426425 670 ntBASIC2.43□□□□□ -2.02
CHMP2AO43633 PTGES3P1-201ENST00000439531 483 ntBASIC2.43□□□□□ -2.02
CHMP2AO43633 MTCO3P11-201ENST00000455103 774 ntBASIC2.43□□□□□ -2.02
CHMP2AO43633 AC233279.1-201ENST00000455300 423 ntBASIC2.43□□□□□ -2.02
CHMP2AO43633 AC138853.1-201ENST00000503549 823 ntBASIC2.43□□□□□ -2.02
CHMP2AO43633 TMEM251P1-201ENST00000503717 318 ntBASIC2.43□□□□□ -2.02
CHMP2AO43633 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.43□□□□□ -2.02
CHMP2AO43633 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.43□□□□□ -2.02
CHMP2AO43633 AP001189.2-201ENST00000527320 189 ntBASIC2.43□□□□□ -2.02
CHMP2AO43633 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.43□□□□□ -2.02
CHMP2AO43633 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.43□□□□□ -2.02
CHMP2AO43633 AC087465.1-201ENST00000560574 245 ntBASIC2.43□□□□□ -2.02
CHMP2AO43633 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.43□□□□□ -2.02
CHMP2AO43633 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.43□□□□□ -2.02
CHMP2AO43633 AL035411.2-201ENST00000604022 421 ntBASIC2.43□□□□□ -2.02
CHMP2AO43633 MTND4LP5-201ENST00000605152 292 ntBASIC2.43□□□□□ -2.02
CHMP2AO43633 AC124016.2-201ENST00000610058 665 ntBASIC2.43□□□□□ -2.02
CHMP2AO43633 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CHMP2AO43633 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CHMP2AO43633 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
CHMP2AO43633 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CHMP2AO43633 CCT4P2-201ENST00000233836 1548 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
CHMP2AO43633 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.42□□□□□ -2.02
CHMP2AO43633 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CHMP2AO43633 DHFRP6-201ENST00000401776 268 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.42□□□□□ -2.02
CHMP2AO43633 AL449283.1-202ENST00000418249 604 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.42□□□□□ -2.02
CHMP2AO43633 PPP1R11P2-201ENST00000423543 382 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.42□□□□□ -2.02
CHMP2AO43633 AC092427.1-201ENST00000439177 601 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.42□□□□□ -2.02
CHMP2AO43633 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.42□□□□□ -2.02
CHMP2AO43633 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.42□□□□□ -2.02
CHMP2AO43633 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CHMP2AO43633 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.42□□□□□ -2.02
CHMP2AO43633 AC093677.1-201ENST00000514414 678 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.42□□□□□ -2.02
CHMP2AO43633 RNA5SP200-201ENST00000516360 103 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 SCARNA16.3-201ENST00000516595 184 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 RNU6-467P-201ENST00000517027 110 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.42□□□□□ -2.02
CHMP2AO43633 AC087241.2-201ENST00000535801 324 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 AC087894.1-201ENST00000538359 518 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.42□□□□□ -2.02
CHMP2AO43633 AC104072.1-201ENST00000568817 668 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 MIR4648-201ENST00000580107 72 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 AL356280.1-201ENST00000603614 379 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 AC068313.1-201ENST00000604028 1008 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 AC009237.15-201ENST00000610252 501 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.42□□□□□ -2.02
CHMP2AO43633 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 AC018926.1-201ENST00000616335 435 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 AC068057.2-201ENST00000624047 895 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.42□□□□□ -2.02
CHMP2AO43633 Z82209.1-201ENST00000422141 2135 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CHMP2AO43633 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.42□□□□□ -2.02
CHMP2AO43633 AC104454.1-201ENST00000421341 1401 ntBASIC2.42□□□□□ -2.02
CHMP2AO43633 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHMP2AO43633 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CHMP2AO43633 SNRPEP3-201ENST00000338402 276 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 RNU6-253P-201ENST00000384730 105 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 HMGB1P17-201ENST00000403495 628 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 MIR1261-201ENST00000408659 82 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 HMGB1P11-201ENST00000413899 637 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 AL592310.1-201ENST00000414330 671 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 USP9YP21-201ENST00000420603 432 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms