Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 RANP9-201ENST00000519957 271 ntBASIC3.58□□□□□ -1.84
C4orf47A7E2U8 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.58□□□□□ -1.84
C4orf47A7E2U8 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.58□□□□□ -1.84
C4orf47A7E2U8 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.58□□□□□ -1.84
C4orf47A7E2U8 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.58□□□□□ -1.84
C4orf47A7E2U8 AC034268.2-201ENST00000571784 482 ntBASIC3.58□□□□□ -1.84
C4orf47A7E2U8 MTCO3P13-201ENST00000577757 781 ntBASIC3.58□□□□□ -1.84
C4orf47A7E2U8 AC005498.1-201ENST00000592125 465 ntBASIC3.58□□□□□ -1.84
C4orf47A7E2U8 MIR98-201ENST00000606724 119 ntBASIC3.58□□□□□ -1.84
C4orf47A7E2U8 RNU6-87P-201ENST00000607561 108 ntBASIC3.58□□□□□ -1.84
C4orf47A7E2U8 AL161734.1-201ENST00000609720 557 ntBASIC3.58□□□□□ -1.84
C4orf47A7E2U8 RMST_3.1-201ENST00000611651 109 ntBASIC3.58□□□□□ -1.84
C4orf47A7E2U8 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
C4orf47A7E2U8 AC006504.8-201ENST00000621046 635 ntBASIC3.58□□□□□ -1.84
C4orf47A7E2U8 YWHAEP7-203ENST00000622054 312 ntBASIC3.58□□□□□ -1.84
C4orf47A7E2U8 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.58□□□□□ -1.84
C4orf47A7E2U8 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
C4orf47A7E2U8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
C4orf47A7E2U8 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.58□□□□□ -1.84
C4orf47A7E2U8 ZNF734P-201ENST00000419494 1534 ntBASIC3.58□□□□□ -1.84
C4orf47A7E2U8 AC097714.1-201ENST00000511272 1647 ntBASIC3.58□□□□□ -1.84
C4orf47A7E2U8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
C4orf47A7E2U8 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.58□□□□□ -1.84
C4orf47A7E2U8 BDP1P-201ENST00000582658 1990 ntBASIC3.58□□□□□ -1.84
C4orf47A7E2U8 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
C4orf47A7E2U8 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 RNU4-35P-201ENST00000362588 141 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 Y_RNA.46-201ENST00000362695 102 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 RNU6-451P-201ENST00000362921 107 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 RNY3P3-201ENST00000363816 102 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 SNORD82-201ENST00000365530 70 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 Y_RNA.381-201ENST00000365666 102 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 RNU6-339P-201ENST00000384310 107 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 Y_RNA.481-201ENST00000384373 102 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 RPL7P25-201ENST00000404151 721 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 USP9YP20-201ENST00000419224 558 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 SNRPEP10-201ENST00000420249 274 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 AL590233.1-201ENST00000430017 456 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 AL353743.1-202ENST00000431724 1695 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 RPL7P28-201ENST00000437739 740 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 HMGB3P12-201ENST00000438745 556 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 AC127537.2-201ENST00000439258 465 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 CALM1P1-201ENST00000442082 433 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 RPS20P20-201ENST00000460498 340 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 RPL23AP62-201ENST00000463396 453 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 AP001025.2-201ENST00000490908 477 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 RAC1P2-201ENST00000511164 579 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 SNORA70.18-201ENST00000516696 98 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 EIF4BP1-201ENST00000554881 351 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 SUB1P2-201ENST00000556401 297 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 LARP7P3-201ENST00000579888 337 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 AL353997.4-201ENST00000586196 166 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 AC007621.1-201ENST00000604544 437 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 AL136363.1-201ENST00000605349 337 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 PART1_1.1-201ENST00000611761 217 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 MIR7112-201ENST00000616126 65 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 AL049780.3-201ENST00000624612 1583 ntBASIC3.57□□□□□ -1.84
C4orf47A7E2U8 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
C4orf47A7E2U8 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
C4orf47A7E2U8 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
C4orf47A7E2U8 RNU6-28P-201ENST00000362378 107 ntBASIC3.56□□□□□ -1.84
C4orf47A7E2U8 RNU6-600P-201ENST00000362524 99 ntBASIC3.56□□□□□ -1.84
C4orf47A7E2U8 RNU6-332P-201ENST00000391193 108 ntBASIC3.56□□□□□ -1.84
C4orf47A7E2U8 AC127391.1-201ENST00000411737 98 ntBASIC3.56□□□□□ -1.84
C4orf47A7E2U8 PDCL2P1-201ENST00000419302 352 ntBASIC3.56□□□□□ -1.84
C4orf47A7E2U8 PSMA6P3-201ENST00000428242 164 ntBASIC3.56□□□□□ -1.84
C4orf47A7E2U8 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.56□□□□□ -1.84
C4orf47A7E2U8 AC087650.1-201ENST00000431445 468 ntBASIC3.56□□□□□ -1.84
C4orf47A7E2U8 ATP5JP1-201ENST00000431631 322 ntBASIC3.56□□□□□ -1.84
C4orf47A7E2U8 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.56□□□□□ -1.84
C4orf47A7E2U8 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.56□□□□□ -1.84
C4orf47A7E2U8 RPS17P13-201ENST00000448974 407 ntBASIC3.56□□□□□ -1.84
C4orf47A7E2U8 RPL36AP51-201ENST00000487216 318 ntBASIC3.56□□□□□ -1.84
C4orf47A7E2U8 AC023194.1-201ENST00000493084 308 ntBASIC3.56□□□□□ -1.84
C4orf47A7E2U8 FGF7P4-201ENST00000509595 295 ntBASIC3.56□□□□□ -1.84
C4orf47A7E2U8 AC010486.1-201ENST00000511793 424 ntBASIC3.56□□□□□ -1.84
C4orf47A7E2U8 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.56□□□□□ -1.84
C4orf47A7E2U8 AP005639.2-201ENST00000527592 928 ntBASIC3.56□□□□□ -1.84
C4orf47A7E2U8 HPRT1P3-201ENST00000539521 576 ntBASIC3.56□□□□□ -1.84
C4orf47A7E2U8 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.56□□□□□ -1.84
C4orf47A7E2U8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.56□□□□□ -1.84
C4orf47A7E2U8 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms