Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC016957.1-201ENST00000534895 309 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 AP001180.3-201ENST00000582221 145 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 AC133794.1-201ENST00000602731 914 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 AC055876.5-201ENST00000605667 259 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 AC069545.1-201ENST00000605671 358 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 AC092608.3-201ENST00000625017 386 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 AP003485.1-201ENST00000625093 753 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 Y_RNA.393-201ENST00000383936 102 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC241520.1-201ENST00000422654 1099 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AL158053.1-201ENST00000441503 453 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 MRPL42P4-201ENST00000453267 443 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC097493.1-201ENST00000463958 372 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 RBM43P1-201ENST00000476891 1081 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC090453.1-201ENST00000495560 436 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AIG1P1-201ENST00000503376 148 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC048346.1-201ENST00000510247 144 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 FRG1HP-204ENST00000617940 757 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 U6.107-201ENST00000637108 79 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC012321.1-201ENST00000561622 1588 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 RNU6-796P-201ENST00000391086 107 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AL356057.2-201ENST00000403318 432 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC093422.3-201ENST00000428506 305 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 RPL36P19-201ENST00000430744 301 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC013828.1-201ENST00000481845 158 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 RPS3AP22-201ENST00000488297 769 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 RPS29P20-201ENST00000489592 171 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 MTCO3P27-201ENST00000514397 196 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC022634.1-201ENST00000520765 532 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 PRELID2P1-201ENST00000552837 301 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC074051.3-201ENST00000570238 358 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 BNIP3P4-201ENST00000604946 565 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC097468.3-201ENST00000607956 456 ntBASIC1.38□□□□□ -2.19
COL6A6A6NMZ7 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 AL157700.1-201ENST00000561973 1432 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 Y_RNA.30-201ENST00000362572 97 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 RNU6-1339P-201ENST00000363574 91 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 Y_RNA.251-201ENST00000364551 99 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 RNU6-821P-201ENST00000390995 107 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 RNU6-932P-201ENST00000391108 106 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 WARS2P1-201ENST00000429678 537 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 GTF2IP7-202ENST00000436677 309 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 RPL23AP33-201ENST00000442301 452 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 AC008379.1-201ENST00000463655 464 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 RNU6-467P-201ENST00000517027 110 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 SNORA76.2-201ENST00000517095 137 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 AC087272.1-201ENST00000523624 533 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 GAS5-AS1-201ENST00000602767 694 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 AL355812.1-201ENST00000603215 216 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 AL583856.2-201ENST00000606298 543 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 AP001033.2-201ENST00000609701 1003 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 AC018926.3-201ENST00000618841 406 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 AC006249.1-201ENST00000621223 471 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 AL121594.5-201ENST00000631724 573 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 MIRLET7G-201ENST00000362280 84 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 RNU6-543P-201ENST00000362576 108 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 SNORA63.3-201ENST00000362682 132 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 RNA5SP391-201ENST00000363456 119 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 SNORD51-201ENST00000384320 80 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 PRRC2CP1-201ENST00000404428 159 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 AC096533.1-201ENST00000411645 353 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 USP9YP19-201ENST00000412165 485 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms