Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 RNU1-103P-201ENST00000516502 125 ntBASIC3.03□□□□□ -1.92
TRIM49BA6NDI0 AP000867.2-201ENST00000532468 320 ntBASIC3.03□□□□□ -1.92
TRIM49BA6NDI0 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM49BA6NDI0 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM49BA6NDI0 AC079600.2-201ENST00000550076 130 ntBASIC3.03□□□□□ -1.92
TRIM49BA6NDI0 OR4H12P-201ENST00000556269 907 ntBASIC3.03□□□□□ -1.92
TRIM49BA6NDI0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TRIM49BA6NDI0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.03□□□□□ -1.92
TRIM49BA6NDI0 AC119751.7-201ENST00000600494 245 ntBASIC3.03□□□□□ -1.92
TRIM49BA6NDI0 AL596327.1-201ENST00000603629 213 ntBASIC3.03□□□□□ -1.92
TRIM49BA6NDI0 MTCYBP22-201ENST00000603788 447 ntBASIC3.03□□□□□ -1.92
TRIM49BA6NDI0 AC004832.5-201ENST00000608677 401 ntBASIC3.03□□□□□ -1.92
TRIM49BA6NDI0 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.03□□□□□ -1.92
TRIM49BA6NDI0 AC135507.2-201ENST00000612443 309 ntBASIC3.03□□□□□ -1.92
TRIM49BA6NDI0 Z69908.1-201ENST00000622603 247 ntBASIC3.03□□□□□ -1.92
TRIM49BA6NDI0 AC099063.3-201ENST00000642066 185 ntBASIC3.03□□□□□ -1.92
TRIM49BA6NDI0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.03□□□□□ -1.92
TRIM49BA6NDI0 AC092104.1-201ENST00000497346 1441 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 AC011477.1-204ENST00000623416 1325 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 MIR26A1-201ENST00000362205 77 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 RNU5A-1-201ENST00000362698 116 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 Y_RNA.97-201ENST00000363094 102 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 RNU1-112P-201ENST00000364401 164 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 RNA5SP88-201ENST00000365560 109 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 Y_RNA.436-201ENST00000384097 102 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 AL512633.1-201ENST00000399931 655 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 HMGB1P17-201ENST00000403495 628 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 AC010153.1-201ENST00000432862 727 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 AC112220.1-201ENST00000434628 355 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 RPS20P5-201ENST00000434808 360 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 AL360221.1-201ENST00000445989 335 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 RPL30P5-201ENST00000494923 336 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 HIGD1AP13-201ENST00000509878 289 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 AC022080.3-201ENST00000544433 482 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 RSL24D1P11-201ENST00000591045 491 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 AL137843.1-201ENST00000605078 385 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 AC105129.3-201ENST00000605455 485 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 AC064807.4-201ENST00000607201 407 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 AC009090.3-201ENST00000616553 565 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 CR381653.2-201ENST00000624041 768 ntBASIC3.02□□□□□ -1.93
TRIM49BA6NDI0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 AL445523.1-201ENST00000451184 1362 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 Y_RNA.18-201ENST00000362461 102 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 RNU6-723P-201ENST00000383973 107 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 RPS3AP24-201ENST00000407896 734 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 RNA5SP344-201ENST00000411081 104 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 MTND5P14-201ENST00000441481 1267 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 AL135938.1-201ENST00000443141 297 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 SNRPGP6-201ENST00000451124 220 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 AC109486.1-201ENST00000486833 374 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 AC109464.2-201ENST00000510242 943 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 OR5BM1P-201ENST00000512021 366 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 RN7SKP282-201ENST00000516824 299 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 AC087276.1-201ENST00000529659 480 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 AC013828.2-201ENST00000532487 235 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 AL355836.1-201ENST00000555951 870 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 AC023043.3-201ENST00000593113 385 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 AC011451.2-201ENST00000604303 598 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 AL390862.1-201ENST00000635467 1469 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 AC093010.3-201ENST00000570269 15214 ntBASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
TRIM49BA6NDI0 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3□□□□□ -1.93
TRIM49BA6NDI0 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3□□□□□ -1.93
TRIM49BA6NDI0 U3.4-201ENST00000363352 213 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 RNU1-140P-201ENST00000365040 165 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRIM49BA6NDI0 SNORD116-9-201ENST00000384000 95 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 SNORD116-3-201ENST00000384287 95 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 SNORD116-7-201ENST00000384404 95 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 SNORD116-5-201ENST00000384462 95 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3□□□□□ -1.93
TRIM49BA6NDI0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3□□□□□ -1.93
TRIM49BA6NDI0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms