Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL355810.1-201ENST00000614629 552 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.31□□□□□ -1.72
SHISA3A0PJX4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 AL691447.3-201ENST00000635020 330 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHISA3A0PJX4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SHISA3A0PJX4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.31□□□□□ -1.72
SHISA3A0PJX4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHISA3A0PJX4 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHISA3A0PJX4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHISA3A0PJX4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SHISA3A0PJX4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.3□□□□□ -1.72
SHISA3A0PJX4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHISA3A0PJX4 DEFB108F-201ENST00000344638 222 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 Y_RNA.19-201ENST00000362462 99 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 RN7SKP162-201ENST00000363605 345 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 Y_RNA.533-201ENST00000384596 114 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 MIR195-201ENST00000385194 87 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 SNORA69.1-201ENST00000390904 137 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 RN7SKP229-201ENST00000410465 302 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 RNU6-1025P-201ENST00000410629 104 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 AC079355.1-201ENST00000421770 223 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 CYCSP6-201ENST00000434498 302 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.3□□□□□ -1.72
SHISA3A0PJX4 RPS20P22-201ENST00000473700 357 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.3□□□□□ -1.72
SHISA3A0PJX4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.3□□□□□ -1.72
SHISA3A0PJX4 AC109329.1-201ENST00000518744 317 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.3□□□□□ -1.72
SHISA3A0PJX4 ATP5F1P5-201ENST00000526403 760 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.3□□□□□ -1.72
SHISA3A0PJX4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.3□□□□□ -1.72
SHISA3A0PJX4 AL049839.1-201ENST00000556151 657 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 MIR5696-201ENST00000578474 85 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 SNORD95-201ENST00000579879 68 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 RN7SL52P-201ENST00000584271 284 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.3□□□□□ -1.72
SHISA3A0PJX4 FO393422.1-201ENST00000603908 708 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 AL365434.2-201ENST00000607979 234 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 AC096772.1-201ENST00000609146 564 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 AC064801.1-201ENST00000612025 407 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 MIR1244-1-201ENST00000612829 85 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 AC004852.3-201ENST00000614131 326 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 AC006065.5-201ENST00000623427 349 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 MIR1244-3-201ENST00000635744 85 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 MIR1244-2-201ENST00000636449 85 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 MIR1244-4-202ENST00000636813 85 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.3□□□□□ -1.72
SHISA3A0PJX4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SHISA3A0PJX4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SHISA3A0PJX4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHISA3A0PJX4 AL356489.2-201ENST00000566968 3528 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.3□□□□□ -1.72
SHISA3A0PJX4 MTND5P9-201ENST00000503854 1755 ntBASIC4.3□□□□□ -1.72
SHISA3A0PJX4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 Y_RNA.60-201ENST00000362831 98 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 Y_RNA.64-201ENST00000362845 102 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 RNU6-595P-201ENST00000363944 107 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 RNU6-611P-201ENST00000384276 104 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 OR3A2-201ENST00000408891 1076 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 EIF4A1P3-201ENST00000411521 244 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 EI24P1-201ENST00000416584 867 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 AL132765.1-201ENST00000434165 553 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 AC004938.1-201ENST00000438468 308 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 RPS11P7-201ENST00000442125 465 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 PTMAP3-201ENST00000447474 330 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 RNU7-169P-201ENST00000459456 61 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 RN7SL214P-201ENST00000487317 265 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 AL049874.1-201ENST00000489560 388 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 RN7SL466P-201ENST00000497546 295 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 MTND1P19-201ENST00000511780 315 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 AC007016.1-201ENST00000512110 244 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 RNU6-897P-201ENST00000517135 105 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 AC034114.1-201ENST00000520293 285 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 FKBP1BP1-201ENST00000553366 325 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 HNRNPCP4-201ENST00000571636 900 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 FAM60BP-201ENST00000578364 658 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 HMGB2P1-201ENST00000591146 634 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 AC009314.1-201ENST00000603871 304 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 AL589674.2-201ENST00000604304 337 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 AC104695.2-201ENST00000605056 775 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 MIR8076-201ENST00000611401 83 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 MIR6826-201ENST00000617808 98 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms