Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 U3.44-201ENST00000458938 192 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 RNU6-261P-201ENST00000459506 102 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 RPL31P58-201ENST00000469001 379 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 AP000926.1-201ENST00000479573 241 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 AC021205.2-201ENST00000480069 347 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 AC116562.3-201ENST00000506136 177 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 AC117522.1-201ENST00000509821 380 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 RNU6-1281P-201ENST00000516223 105 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 SNORA70.19-201ENST00000516717 90 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 RNU6-835P-201ENST00000516974 104 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 AC068587.5-201ENST00000528506 175 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 SNRPGP16-201ENST00000533275 226 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 AC068135.2-201ENST00000569293 1028 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 AP000907.4-201ENST00000604143 237 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 SDR42E1P2-201ENST00000614861 481 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 AC093648.1-201ENST00000623546 606 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 PRO1804-201ENST00000623780 2050 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.53□□□□□ -1.85
TCRBV7S3A2A0A539 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 SNORA51.2-201ENST00000364595 132 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 RNU6-534P-201ENST00000364877 106 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 RNA5SP167-201ENST00000365461 116 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AL590704.1-201ENST00000402856 794 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 USP9YP6-201ENST00000413550 854 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 SDCBPP3-201ENST00000419629 891 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 RPL17P36-201ENST00000420302 549 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AL138799.3-201ENST00000438968 350 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 MTCO3P18-201ENST00000440206 761 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC016691.1-201ENST00000441321 413 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 WASF1P1-201ENST00000447560 1131 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 RPS29P25-201ENST00000481709 171 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC108860.1-201ENST00000484521 383 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 NIPA2P2-201ENST00000496376 1083 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC116353.2-201ENST00000505332 712 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC026427.2-201ENST00000506228 536 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC004062.1-201ENST00000509926 645 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC105417.1-201ENST00000514691 285 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 SNORA31.8-201ENST00000516327 108 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 RNU6-1073P-201ENST00000517182 106 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 NCAPGP2-201ENST00000557911 754 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 MED28P6-201ENST00000558776 231 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 MIR3160-1-201ENST00000577972 85 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC024619.4-201ENST00000580924 316 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC008536.2-201ENST00000607284 349 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC010133.1-201ENST00000615809 842 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 FER-210ENST00000628534 558 ntTSL 5 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TCRBV7S3A2A0A539 CKAP2P1-201ENST00000555477 2049 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AC032011.1-201ENST00000611703 1549 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 RNU6-641P-201ENST00000384006 107 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 Z99755.1-201ENST00000414048 380 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 SNRPEP10-201ENST00000420249 274 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 MTND4LP11-201ENST00000422184 280 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AL445584.1-201ENST00000431451 330 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AC091390.1-201ENST00000433904 331 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 NOTCH2P1-201ENST00000443481 624 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AC020550.1-201ENST00000447385 163 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms