Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 HSPE1P6-201ENST00000479457 291 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AC103975.1-201ENST00000482506 483 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 FAM172BP-201ENST00000487497 1089 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 RPS3AP22-201ENST00000488297 769 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AC008413.1-201ENST00000511864 177 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 MRPS33P3-201ENST00000513456 322 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 RN7SKP24-201ENST00000515888 284 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 SETP2-201ENST00000553886 926 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 COX6CP3-201ENST00000580869 223 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 MIR3670-2-201ENST00000582974 65 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 MIR3670-1-201ENST00000584160 65 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 MIR3670-3-201ENST00000584855 65 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AP001029.3-201ENST00000588063 596 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AL158211.4-201ENST00000606988 584 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AC107294.1-201ENST00000609524 467 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AC131902.3-201ENST00000611767 581 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 MIR3670-4-201ENST00000612260 65 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AL110115.1-201ENST00000614396 364 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AC008443.7-201ENST00000622195 246 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 CR381653.2-201ENST00000624041 768 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AC012321.1-201ENST00000561622 1588 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 RNU6-97P-201ENST00000363387 104 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 XGY1-201ENST00000381172 446 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 Y_RNA.560-201ENST00000384689 102 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 RNU6-253P-201ENST00000384730 105 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 RNA5SP210-201ENST00000391034 120 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AL136372.1-201ENST00000403060 228 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 RNU2-43P-201ENST00000410306 190 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AC083875.1-201ENST00000419509 405 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AL137014.1-201ENST00000420490 1226 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 BEND7P1-201ENST00000422058 457 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 MTATP6P4-201ENST00000427725 675 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AC011816.1-201ENST00000441346 546 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 FAM103A2P-201ENST00000444122 354 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AC104389.3-201ENST00000445629 235 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 snoU13.8-201ENST00000458890 104 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AC021382.1-201ENST00000483523 359 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 LINC00888-204ENST00000487386 421 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AC093809.1-201ENST00000509155 340 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 TBCAP3-201ENST00000512475 312 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 SNORA70.16-201ENST00000516390 95 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AC087373.1-201ENST00000524920 491 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 MTATP6P15-201ENST00000527233 835 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 ISCA1P3-201ENST00000577104 373 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 WISP1-OT1-201ENST00000602893 642 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AL356575.1-201ENST00000603008 283 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AC116312.1-201ENST00000606841 314 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AC008147.4-201ENST00000617570 1204 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AL603758.1-201ENST00000618654 241 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 U4.3-201ENST00000621047 82 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AC025034.2-201ENST00000623264 286 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AC112204.3-201ENST00000623822 332 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AC097520.1-201ENST00000624435 385 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 PCMTD1P7-201ENST00000634506 357 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 CRYM-AS1-204ENST00000637983 556 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AC099063.3-201ENST00000642066 185 ntBASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.07□□□□□ -2.08
TRAV40A0A0B4J280 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AL161781.1-201ENST00000354277 403 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms