Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 RNU6-575P-201ENST00000411326 105 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 AL136133.1-201ENST00000413694 376 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 AL590383.1-201ENST00000428602 75 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 ARF4P4-201ENST00000439608 520 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 AL049734.2-201ENST00000441066 616 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 RNU7-140P-201ENST00000459546 60 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 RPS29P20-201ENST00000489592 171 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 HMGB3P17-201ENST00000504195 649 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 AC022447.3-201ENST00000506865 495 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 AC090502.2-201ENST00000549267 280 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 AC009063.1-201ENST00000563342 702 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 MIR4666A-201ENST00000580160 79 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 RN7SL622P-201ENST00000585292 275 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 AL671309.1-201ENST00000603750 544 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 AC080013.4-201ENST00000607624 649 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 AL356266.1-201ENST00000623311 483 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 AP006437.1-201ENST00000641440 3685 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 DDX10P1-201ENST00000448545 1933 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 MIR217-201ENST00000384817 110 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 MIR514A1-201ENST00000385133 98 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 RNU6-220P-201ENST00000390919 107 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AL357078.2-201ENST00000416486 427 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AC018630.2-202ENST00000422992 927 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AC007742.1-201ENST00000425789 329 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 ELOCP26-201ENST00000436067 329 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AC108938.1-201ENST00000451204 136 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 TRGVB-201ENST00000453257 471 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 ANKRD26P4-201ENST00000455755 950 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 ATG12P2-201ENST00000456830 416 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 TRBV12-1-201ENST00000479785 344 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 LARP1BP2-201ENST00000486594 519 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 MTAPP1-201ENST00000489154 819 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AC114786.4-201ENST00000508771 728 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AC114797.1-201ENST00000514003 728 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 RNU5F-8P-201ENST00000515941 111 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 SNORA76.2-201ENST00000517095 137 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AP002748.2-201ENST00000528671 348 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AC007375.1-201ENST00000554513 578 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AC087465.1-201ENST00000560574 245 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 MIR3618-201ENST00000580330 88 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AC040174.2-201ENST00000602701 465 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AL355877.2-201ENST00000603670 358 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AC091946.2-201ENST00000606105 291 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AL590808.1-201ENST00000618696 141 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AC116618.1-201ENST00000634617 774 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 MTND5P6-201ENST00000422338 1798 ntBASIC1.47□□□□□ -2.17
TRAV1-1A0A0B4J248 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AC080128.1-201ENST00000474389 1917 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU5A-1-201ENST00000362698 116 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU6-353P-201ENST00000364266 108 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU6-657P-201ENST00000383904 107 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU1-73P-201ENST00000383971 164 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU6-932P-201ENST00000391108 106 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 RNA5SP425-201ENST00000410336 112 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 RN7SKP192-201ENST00000411291 327 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AC023141.4-201ENST00000412031 328 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 RPS20P15-201ENST00000412792 311 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AC009963.1-201ENST00000417265 157 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 EIF1AXP1-201ENST00000419267 435 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AC246680.2-201ENST00000422106 389 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 FAM204CP-201ENST00000424489 642 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 MICF-203ENST00000432679 129 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms