Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 RNU6-670P-201ENST00000364312 104 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 SNORA70B-201ENST00000384210 135 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 RNU2-41P-201ENST00000410991 178 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 OR51A3P-201ENST00000413596 924 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 TATDN1P1-201ENST00000414123 891 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 MTND5P25-201ENST00000430499 799 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 AC097499.1-201ENST00000444277 208 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 RPL23AP3-201ENST00000453844 468 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 AC004223.1-201ENST00000479840 271 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 AC068781.1-201ENST00000488231 618 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 RPL30P5-201ENST00000494923 336 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 SCARNA17.1-201ENST00000516211 143 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 SCARNA17.2-201ENST00000516334 143 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 SCARNA11.3-201ENST00000517276 130 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 C1DP5-201ENST00000525775 383 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 AC067805.1-201ENST00000559344 470 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 BNIP3P22-201ENST00000593399 556 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 AC021749.1-201ENST00000604322 607 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 AC012443.1-201ENST00000605605 231 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 AC110792.4-201ENST00000609843 298 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 SCARNA17.4-201ENST00000614296 143 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 AC008568.2-201ENST00000623862 2313 ntBASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.07□□□□□ -2.24
TRAV1-2A0A0B4J238 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 AC010329.5-201ENST00000623497 2174 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 SNORA40.6-201ENST00000391153 128 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 AL109913.1-201ENST00000421173 514 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 HSPE1P21-201ENST00000438283 308 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 AC016691.1-201ENST00000441321 413 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 Z82190.1-201ENST00000454534 490 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 MTCO1P42-201ENST00000457379 726 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 RNU6-420P-201ENST00000458780 107 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 RPL31P60-201ENST00000478450 367 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 PCNAP1-201ENST00000505363 709 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 AC008676.3-201ENST00000521237 435 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 AC025857.1-201ENST00000525252 377 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 AC084033.1-201ENST00000550830 633 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 MIR3660-201ENST00000584845 100 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 AC025165.5-201ENST00000602802 578 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 AL050343.2-201ENST00000607338 280 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 AP002826.1-201ENST00000608835 315 ntBASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.06□□□□□ -2.24
TRAV1-2A0A0B4J238 RNU1-148P-201ENST00000384472 162 ntBASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 MIR1285-1-201ENST00000408593 84 ntBASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 AL591704.2-201ENST00000421658 181 ntBASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 AC004383.1-201ENST00000438135 289 ntBASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 RPS29P28-201ENST00000446439 141 ntBASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 AC233982.1-201ENST00000451247 436 ntBASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 SUMO1P1-201ENST00000497904 306 ntBASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 TPT1P8-201ENST00000510120 555 ntBASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 AC103987.3-201ENST00000582071 292 ntBASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 MIMT1-201ENST00000597105 1050 ntBASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 AC040168.1-201ENST00000623594 991 ntBASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 CCT4P2-201ENST00000233836 1548 ntBASIC1.05□□□□□ -2.24
TRAV1-2A0A0B4J238 ZNF209P-201ENST00000593450 2304 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms