Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 FAM27B-201ENST00000610601 213 ntBASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 AC064801.1-201ENST00000612025 407 ntBASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 AC104964.3-201ENST00000606115 2860 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 AC125257.1-201ENST00000560400 2930 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 RNA5SP171-201ENST00000391071 115 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 AL030996.1-201ENST00000411430 235 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 RAC1P3-201ENST00000416129 580 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 BX842559.1-201ENST00000419615 532 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 AC009238.2-201ENST00000431026 355 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 AC073063.1-201ENST00000434352 607 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 RPL23AP33-201ENST00000442301 452 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 MRPL48P1-201ENST00000445390 636 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 RPL23AP24-201ENST00000458203 385 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 AC007016.1-201ENST00000512110 244 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 RNA5SP392-201ENST00000516905 112 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 AC144568.1-201ENST00000520139 137 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 AC012433.1-201ENST00000588916 398 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 MIR15A-201ENST00000607334 83 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 AC099669.2-201ENST00000616549 437 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 MIR6130-201ENST00000619419 109 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 AL159153.1-201ENST00000619688 317 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 SNORD39.4-201ENST00000620099 78 ntBASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ZC3H4Q9UPT8 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 Y_RNA.471-201ENST00000384312 102 ntBASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 AC092423.1-201ENST00000430165 186 ntBASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 AC110792.1-201ENST00000491826 472 ntBASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 RN7SL441P-201ENST00000492388 296 ntBASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 AC023424.1-201ENST00000496058 459 ntBASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 ENPP7P11-201ENST00000505915 627 ntBASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 AC009852.2-201ENST00000567898 485 ntBASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 AC004584.2-201ENST00000570407 410 ntBASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 MIR3138-201ENST00000585238 82 ntBASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 AL450472.3-201ENST00000615578 367 ntBASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 AL031601.2-202ENST00000622650 282 ntBASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZC3H4Q9UPT8 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 SAGE4P-201ENST00000442271 3381 ntBASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 RNU1-94P-201ENST00000362627 173 ntBASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 RNU6-212P-201ENST00000362642 104 ntBASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 RNU6-356P-201ENST00000384140 107 ntBASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 MIR135A2-201ENST00000384854 100 ntBASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 HMGB1P27-201ENST00000431429 603 ntBASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 MTND3P25-201ENST00000509243 135 ntBASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 AC040958.1-201ENST00000561102 201 ntBASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 RPL23AP87-202ENST00000573039 466 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms