Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 RNU1-43P-201ENST00000365052 165 ntBASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 SNORA70.6-201ENST00000383934 134 ntBASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 RNU6-578P-201ENST00000390980 103 ntBASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 AL158823.1-201ENST00000418441 478 ntBASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 AIMP1P2-201ENST00000425294 312 ntBASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 AL139148.1-201ENST00000427122 680 ntBASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 HMGB1P27-201ENST00000431429 603 ntBASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 AC108161.1-201ENST00000461060 402 ntBASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 AC005868.1-201ENST00000536421 331 ntBASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 MIR7853-201ENST00000584820 132 ntBASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 AC126915.2-201ENST00000610957 190 ntBASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 MIR6719-201ENST00000622428 87 ntBASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 U6.95-201ENST00000636931 70 ntBASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 PROS2P-201ENST00000474651 1951 ntBASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM35Q9UPQ4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 RNVU1-3-201ENST00000364313 161 ntBASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 RNU5E-7P-201ENST00000365290 117 ntBASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 RNU6-381P-201ENST00000391259 108 ntBASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 RNU1-139P-201ENST00000391307 165 ntBASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 NDUFB4P7-201ENST00000423198 363 ntBASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 AC005154.2-201ENST00000438110 379 ntBASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 Y_RNA.651-201ENST00000459380 103 ntBASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 AC092991.1-201ENST00000477176 376 ntBASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 RPS15AP34-201ENST00000487776 387 ntBASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 RN7SL30P-201ENST00000488416 306 ntBASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 RPL36AP41-201ENST00000493820 306 ntBASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 AK3P2-201ENST00000507976 429 ntBASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 RN7SKP49-201ENST00000516675 260 ntBASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 AC239868.2-201ENST00000564237 4527 ntBASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 AC008555.8-201ENST00000623602 2168 ntBASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM35Q9UPQ4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 AC022493.1-201ENST00000492984 337 ntBASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 MRPS33P2-201ENST00000507850 322 ntBASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 LARP7P3-201ENST00000579888 337 ntBASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 MIR4744-201ENST00000581563 82 ntBASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 AC010928.2-201ENST00000588017 287 ntBASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 AC005191.1-201ENST00000603950 358 ntBASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 MIR6130-201ENST00000619419 109 ntBASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 AL354798.1-201ENST00000622505 329 ntBASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 C4BPAP1-201ENST00000415474 1893 ntBASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM35Q9UPQ4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 RNU4-80P-201ENST00000363200 141 ntBASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 U3.7-201ENST00000363668 216 ntBASIC6.9□□□□□ -1.3
TRIM35Q9UPQ4 RNA5SP213-201ENST00000391031 106 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms