Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 RNU6-282P-201ENST00000365357 103 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 SNORA9-201ENST00000384215 133 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 RNU4-47P-201ENST00000410876 114 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 MTND1P23-201ENST00000416931 372 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 PIGFP2-201ENST00000421400 651 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 ISCA1P1-201ENST00000426679 387 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 MTND3P21-201ENST00000433774 331 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 RAC1P7-201ENST00000445367 377 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 TPT1P14-201ENST00000448018 505 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 NPM1P49-201ENST00000448027 714 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 AC115115.1-201ENST00000449927 248 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 C1DP4-201ENST00000455429 424 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 AC004801.2-202ENST00000463559 283 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 AL049830.2-201ENST00000480072 201 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 RPS3AP14-201ENST00000483907 780 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 RPL23AP41-201ENST00000484754 458 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 RNU6-528P-201ENST00000516926 100 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 SETP2-201ENST00000553886 926 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 AC012669.1-201ENST00000603209 283 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 AP000860.1-201ENST00000605250 559 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 HMGN2P28-201ENST00000606102 262 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 MIR98-201ENST00000606724 119 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 AC090970.3-201ENST00000612566 866 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 AL592295.2-201ENST00000612578 206 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 uc_338.25-201ENST00000613756 156 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 U73479.1-201ENST00000618062 168 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.44□□□□□ -1.86
SIX4Q9UIU6 AC093536.2-201ENST00000565257 1406 ntBASIC3.44□□□□□ -1.86
SIX4Q9UIU6 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 RNA5SP374-201ENST00000362939 125 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 Y_RNA.372-201ENST00000365599 102 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 MIR19A-201ENST00000384878 82 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 RNU6-780P-201ENST00000391030 104 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 CALM2P3-201ENST00000400429 449 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 RNU4-55P-201ENST00000410731 137 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 RPS15AP12-201ENST00000419498 388 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 AC133104.1-201ENST00000429100 218 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 OR4K11P-201ENST00000431829 904 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 AL139415.2-201ENST00000431968 163 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 USP9YP15-201ENST00000442391 422 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 Z99127.3-201ENST00000448158 395 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 AC003071.1-201ENST00000451219 789 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 ELOCP23-201ENST00000452014 332 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 HMGN1P18-201ENST00000457642 277 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 RN7SL863P-201ENST00000462370 296 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 ST13P14-201ENST00000474095 734 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 RPL31P13-201ENST00000484151 370 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 HMGB1P29-201ENST00000505659 499 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 Vault.3-201ENST00000516676 95 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 RNU6-798P-201ENST00000516912 103 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 RNU6-1220P-201ENST00000517126 108 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 FAM92A1P1-201ENST00000528023 890 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.43□□□□□ -1.86
SIX4Q9UIU6 ZNF519P2-201ENST00000557032 169 ntBASIC3.43□□□□□ -1.86
SIX4Q9UIU6 MIR3146-201ENST00000580367 79 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms