Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNU6-1095P-201ENST00000516148 108 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC88CQ9P219 MTCYBP27-201ENST00000555160 670 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 FAM60BP-201ENST00000578364 658 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC88CQ9P219 AC025588.4-201ENST00000615802 908 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 AL512506.2-201ENST00000624472 458 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC88CQ9P219 RNU6-989P-201ENST00000362756 107 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 RNU5D-1-201ENST00000363299 116 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 RNU2-47P-201ENST00000410649 186 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC88CQ9P219 PAICSP7-201ENST00000419829 962 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC88CQ9P219 ARPC3P1-201ENST00000437218 533 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 HMGB1P18-201ENST00000438801 619 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC88CQ9P219 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC88CQ9P219 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC88CQ9P219 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC88CQ9P219 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC88CQ9P219 NIFKP8-201ENST00000560500 874 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 MIR4255-201ENST00000579351 72 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC88CQ9P219 MIR3935-201ENST00000583472 104 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 HSPE1P7-201ENST00000604681 321 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 AC006213.5-201ENST00000619673 288 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 AC091953.2-201ENST00000623979 160 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 BX649567.1-201ENST00000642071 1134 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 OR5H6-203ENST00000642105 978 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 AC025263.3-201ENST00000622965 1396 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 AC008669.1-201ENST00000565823 2178 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC88CQ9P219 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CCDC88CQ9P219 AL022578.1-201ENST00000439330 1433 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
CCDC88CQ9P219 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
CCDC88CQ9P219 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CCDC88CQ9P219 AL589826.1-201ENST00000340697 249 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 DEFB108F-201ENST00000344638 222 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 SNORA26.9-201ENST00000391322 122 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 AL021407.1-201ENST00000404531 386 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC88CQ9P219 PNRC2P1-201ENST00000423940 420 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 AC012497.1-201ENST00000429392 575 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 AC024082.2-201ENST00000434771 238 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 UBE2FP3-201ENST00000436366 524 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 AC009237.8-201ENST00000445492 379 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC88CQ9P219 RPL31P60-201ENST00000478450 367 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 AC022493.1-201ENST00000492984 337 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC88CQ9P219 AC011352.3-201ENST00000505162 593 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC88CQ9P219 IGJP1-201ENST00000522682 475 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 DEFB108D-201ENST00000527787 222 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.68□□□□□ -2.14
CCDC88CQ9P219 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.68□□□□□ -2.14
CCDC88CQ9P219 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC88CQ9P219 AC024614.2-201ENST00000577584 372 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 AL031176.1-201ENST00000604554 466 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.68□□□□□ -2.14
CCDC88CQ9P219 TPTE2P4-201ENST00000258589 1605 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
CCDC88CQ9P219 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CCDC88CQ9P219 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CCDC88CQ9P219 ZNF72P-201ENST00000425869 1908 ntBASIC1.68□□□□□ -2.14
CCDC88CQ9P219 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CCDC88CQ9P219 SNORD56.4-201ENST00000363883 71 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 RNU6-481P-201ENST00000384194 107 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AL023807.1-201ENST00000407932 359 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 RNU2-40P-201ENST00000410833 196 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AL356320.2-201ENST00000417263 507 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AC234064.1-201ENST00000436312 247 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 GTF2IP7-202ENST00000436677 309 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AL050341.1-201ENST00000447743 313 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 SNRPGP6-201ENST00000451124 220 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 MTND2P3-201ENST00000452458 470 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 snoU109.4-201ENST00000458953 143 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC88CQ9P219 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC88CQ9P219 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.67□□□□□ -2.14
CCDC88CQ9P219 MIR4789-201ENST00000577469 82 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AP001004.1-201ENST00000582468 324 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 BNIP3P24-201ENST00000593398 557 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 NUTF2P8-201ENST00000604593 363 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AC084768.2-201ENST00000622736 221 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AC106730.3-201ENST00000624568 641 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 MFSD8-213ENST00000641134 1327 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC88CQ9P219 UBE2L2-201ENST00000254302 429 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms