Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AC005336.3-201ENST00000623833 2679 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 RNU6-884P-201ENST00000363889 107 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 RN7SKP226-201ENST00000364912 300 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 Y_RNA.311-201ENST00000365068 96 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 RNU6-744P-201ENST00000365557 107 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
CLN6Q9NWW5 RNU6-432P-201ENST00000384196 109 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 RNU6-1316P-201ENST00000384242 108 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 RNU6-754P-201ENST00000391166 107 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AL590084.2-201ENST00000401481 382 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 U3.37-201ENST00000408528 213 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AC007064.1-201ENST00000412238 351 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 MTND1P21-201ENST00000412991 285 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 RPL35AP22-201ENST00000436855 335 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AC007327.1-201ENST00000447461 264 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 ZNF886P-201ENST00000450781 723 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AC073901.1-201ENST00000462471 408 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AL672167.3-201ENST00000465951 960 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AC107626.1-201ENST00000471084 183 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 HMGB1P36-201ENST00000487709 576 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AC090096.1-201ENST00000489168 390 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AC002456.2-201ENST00000509356 380 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AC034159.1-201ENST00000513885 583 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 SNORA31.18-201ENST00000517043 134 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AC091163.3-201ENST00000518269 1144 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.21□□□□□ -2.06
CLN6Q9NWW5 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.21□□□□□ -2.06
CLN6Q9NWW5 MIR3616-201ENST00000584070 92 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 MIR4658-201ENST00000584344 65 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AL161756.2-201ENST00000604597 246 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 TUG1_2.1-201ENST00000614234 87 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AL121895.2-201ENST00000619558 447 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.21□□□□□ -2.06
CLN6Q9NWW5 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
CLN6Q9NWW5 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AC099063.3-201ENST00000642066 185 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 AC092447.10-201ENST00000620607 1652 ntBASIC2.21□□□□□ -2.06
CLN6Q9NWW5 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.21□□□□□ -2.06
CLN6Q9NWW5 RNU6-289P-201ENST00000364093 107 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 RNU1-138P-201ENST00000384093 164 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 RNU2-49P-201ENST00000410666 184 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 HMGB1P49-201ENST00000418882 569 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 ZYG11AP1-201ENST00000430329 837 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 ATP5F1P1-201ENST00000433775 569 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 COX7BP2-201ENST00000437976 242 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 AC105272.1-201ENST00000438604 198 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 AC233279.1-201ENST00000455300 423 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 RPL23AP45-201ENST00000476406 468 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 AC096571.1-202ENST00000506634 735 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 MIR3944-201ENST00000581277 108 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 MIR5195-201ENST00000583555 115 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 AF038458.1-201ENST00000588406 262 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 AC136601.2-201ENST00000604356 474 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 AL049779.4-201ENST00000604500 156 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 BNIP3P31-201ENST00000604515 566 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 AC131235.4-201ENST00000609288 620 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 FO624990.1-201ENST00000636373 85 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 PABPC1P9-201ENST00000426076 1612 ntBASIC2.2□□□□□ -2.06
CLN6Q9NWW5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CLN6Q9NWW5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 RNU6-859P-201ENST00000362728 107 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 RNU6-223P-201ENST00000362830 107 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 SNORA67.1-201ENST00000364749 141 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 RNA5SP171-201ENST00000391071 115 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 SNORA48.7-201ENST00000391302 135 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms