Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ABCF3Q9NUQ8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ABCF3Q9NUQ8 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 SNORD9-201ENST00000362566 104 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 Y_RNA.46-201ENST00000362695 102 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 RNU6-799P-201ENST00000363567 107 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 RNU6-1027P-201ENST00000383998 107 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 SNORA5A-201ENST00000384111 134 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 Y_RNA.582-201ENST00000391023 95 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 RNA5SP252-201ENST00000391131 119 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 MIR548F1-201ENST00000408667 84 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 FCF1P9-201ENST00000412546 282 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 RAB9AP3-201ENST00000412737 573 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 RPL23AP82-202ENST00000427528 469 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 DPPA2P1-201ENST00000428060 556 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 OR2B8P-201ENST00000432841 938 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 AC090774.1-201ENST00000435925 246 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 FAM103A2P-201ENST00000444122 354 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 RAB9AP1-201ENST00000449393 573 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 CENPBD1P1-201ENST00000464061 469 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 AC104563.1-201ENST00000476147 376 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 AP001025.2-201ENST00000490908 477 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 AC092185.1-201ENST00000491371 97 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 AL358832.1-201ENST00000497800 389 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 SAP18P1-201ENST00000512058 390 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 RNU1-95P-201ENST00000516357 160 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 RNU1-128P-201ENST00000516704 160 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 RNU6-714P-201ENST00000516963 103 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 RNU6-430P-201ENST00000517078 107 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 RNU6-1003P-201ENST00000517099 105 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 MTND4LP26-201ENST00000518144 282 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 RANP9-201ENST00000519957 271 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 OR5G4P-201ENST00000525251 760 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 RPL21P5-201ENST00000554662 472 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 GLUD1P4-201ENST00000590914 418 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 TPMTP1-201ENST00000592307 737 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 AL161729.4-201ENST00000604650 476 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 AC090578.1-201ENST00000604955 591 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 AC110801.1-201ENST00000623590 212 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
ABCF3Q9NUQ8 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 MTND5P27-201ENST00000428871 1720 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 RNA5SP383-201ENST00000362934 120 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 RNU6-97P-201ENST00000363387 104 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 RNU6-359P-201ENST00000365466 108 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 RNU6-1042P-201ENST00000384204 107 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 RPL7P25-201ENST00000404151 721 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 RNU6-195P-201ENST00000411352 109 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AC018644.1-201ENST00000429934 551 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 GAPDHP17-201ENST00000449858 1001 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 HSPE1P6-201ENST00000479457 291 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AC112204.1-201ENST00000502591 103 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AC105252.1-201ENST00000503089 286 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AC091133.4-201ENST00000511142 308 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AP003181.2-201ENST00000528941 181 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AC087883.1-201ENST00000551882 391 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AC125611.2-201ENST00000551907 647 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AL157394.1-201ENST00000562983 1224 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 TPRKBP2-201ENST00000565969 475 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AC004067.1-201ENST00000608733 700 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AP001506.1-201ENST00000615444 211 ntBASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ABCF3Q9NUQ8 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ABCF3Q9NUQ8 U8.3-201ENST00000363321 132 ntBASIC3.46□□□□□ -1.86
ABCF3Q9NUQ8 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ABCF3Q9NUQ8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
ABCF3Q9NUQ8 SNORD115.1-201ENST00000391109 76 ntBASIC3.46□□□□□ -1.86
ABCF3Q9NUQ8 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms