Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.37□□□□□ -1.71
VTA1Q9NP79 AL139247.1-201ENST00000422768 325 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 AC008850.1-201ENST00000427546 362 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 HMGB1P37-201ENST00000439613 609 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 RANP8-201ENST00000444720 713 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 AC020550.1-201ENST00000447385 163 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 GAPDHP27-201ENST00000447427 1020 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 AC073415.1-201ENST00000449240 153 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.37□□□□□ -1.71
VTA1Q9NP79 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.37□□□□□ -1.71
VTA1Q9NP79 HSPE1P6-201ENST00000479457 291 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 AC139783.2-201ENST00000504847 1145 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 AC017037.1-201ENST00000508460 471 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 HMGN1P11-201ENST00000508668 303 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 RNA5SP401-201ENST00000515920 127 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.37□□□□□ -1.71
VTA1Q9NP79 CYP4A43P-201ENST00000568156 121 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 MIR5187-201ENST00000583479 76 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.37□□□□□ -1.71
VTA1Q9NP79 AC104763.2-201ENST00000604179 382 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 AC019176.2-201ENST00000611579 315 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 AC022306.2-201ENST00000617563 647 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 AC025034.2-201ENST00000623264 286 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
VTA1Q9NP79 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VTA1Q9NP79 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.36□□□□□ -1.71
VTA1Q9NP79 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.36□□□□□ -1.71
VTA1Q9NP79 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VTA1Q9NP79 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.36□□□□□ -1.71
VTA1Q9NP79 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VTA1Q9NP79 Y_RNA.72-201ENST00000362894 103 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 SNORD74.4-201ENST00000364129 80 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 RNA5SP387-201ENST00000364226 106 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 RNA5SP189-201ENST00000364920 115 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 SNORA36C-201ENST00000384289 132 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 AL591416.1-201ENST00000404015 867 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 NDUFS5P1-201ENST00000405668 289 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 SNORA11.1-201ENST00000408133 129 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.36□□□□□ -1.71
VTA1Q9NP79 RNU6-193P-201ENST00000410977 107 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 OR9R1P-201ENST00000412200 877 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 AC009237.5-201ENST00000414271 501 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 RPL21P111-201ENST00000418453 477 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 ARL5AP1-201ENST00000418991 388 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 AL513185.2-201ENST00000425543 193 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 RPL7L1P10-201ENST00000427790 463 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.36□□□□□ -1.71
VTA1Q9NP79 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.36□□□□□ -1.71
VTA1Q9NP79 AL138799.3-201ENST00000438968 350 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 MTND4P25-201ENST00000441039 533 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.36□□□□□ -1.71
VTA1Q9NP79 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.36□□□□□ -1.71
VTA1Q9NP79 RNU6-953P-201ENST00000459154 107 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 AP000873.1-201ENST00000463987 400 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.36□□□□□ -1.71
VTA1Q9NP79 AC233702.1-201ENST00000482905 502 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 AC106872.2-201ENST00000494303 480 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 RN7SKP219-201ENST00000516825 296 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 Y_RNA.702-201ENST00000516843 96 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 IGKV2-38-201ENST00000517443 247 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 AC007991.1-201ENST00000522680 631 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.36□□□□□ -1.71
VTA1Q9NP79 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.36□□□□□ -1.71
VTA1Q9NP79 OR5AL2P-201ENST00000532185 920 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.36□□□□□ -1.71
VTA1Q9NP79 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.36□□□□□ -1.71
VTA1Q9NP79 HIF1AP1-201ENST00000553642 175 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 BNIP3P10-201ENST00000605360 577 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 AC008945.2-201ENST00000606056 604 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 AL365204.3-201ENST00000612448 685 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 AL355810.1-201ENST00000614629 552 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 AC084757.4-201ENST00000616350 526 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 AC006504.8-201ENST00000621046 635 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
VTA1Q9NP79 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.36□□□□□ -1.71
VTA1Q9NP79 MTND4P14-201ENST00000435799 1354 ntBASIC4.36□□□□□ -1.71
VTA1Q9NP79 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VTA1Q9NP79 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VTA1Q9NP79 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VTA1Q9NP79 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VTA1Q9NP79 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
VTA1Q9NP79 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VTA1Q9NP79 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VTA1Q9NP79 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VTA1Q9NP79 RNU5A-1-201ENST00000362698 116 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 SNORA62.1-201ENST00000364287 154 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 RNA5SP167-201ENST00000365461 116 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 MIR607-201ENST00000385241 96 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 RNU6-817P-201ENST00000391083 104 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 OR6C66P-201ENST00000414917 930 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.35□□□□□ -1.71
VTA1Q9NP79 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.35□□□□□ -1.71
VTA1Q9NP79 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.35□□□□□ -1.71
VTA1Q9NP79 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 CACYBPP2-201ENST00000453625 678 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 RPL23AP31-201ENST00000456160 467 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 RPS20P20-201ENST00000460498 340 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 IGKV2D-19-201ENST00000523346 262 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms