Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AL139421.1-201ENST00000423010 169 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 ZNF863P-201ENST00000426746 417 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 MTND2P20-201ENST00000440805 661 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 RPL23AP76-201ENST00000441860 458 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AP000705.1-201ENST00000454567 350 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AP000852.1-201ENST00000472460 573 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 TRBV12-1-201ENST00000479785 344 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 LARP1BP2-201ENST00000486594 519 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 SUMO2P6-201ENST00000505273 288 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AC008837.2-201ENST00000513076 418 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 RNY4P37-201ENST00000516225 96 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 SNORA9.3-201ENST00000516383 129 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 VN1R78P-201ENST00000597393 564 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AC004987.4-201ENST00000603383 338 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AC136601.2-201ENST00000604356 474 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AL157392.4-201ENST00000609756 345 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AC008498.1-201ENST00000613012 531 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 SNHG22-203ENST00000617833 660 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AL355493.4-201ENST00000618530 292 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AL445984.1-201ENST00000637834 659 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AC131280.1-202ENST00000624067 4211 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AL137003.2-201ENST00000606924 2538 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 RNA5SP393-201ENST00000363423 117 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 RNU4-51P-201ENST00000364206 140 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 RNU6-217P-201ENST00000384164 104 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 MIR592-201ENST00000384959 97 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 RSL24D1P4-201ENST00000400938 484 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 AL356057.3-201ENST00000402607 340 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 AC068533.2-201ENST00000411872 306 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 TPMTP3-201ENST00000411928 735 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 AC104389.3-201ENST00000445629 235 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 AC009961.3-201ENST00000449832 765 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 AC090525.1-201ENST00000479116 478 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 FAM172BP-201ENST00000487497 1089 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 RNA5SP148-201ENST00000516527 94 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 SLC2A13P1-201ENST00000531560 322 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 HIGD1AP17-201ENST00000554576 276 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 AL391261.3-201ENST00000557194 520 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 MTCYBP23-201ENST00000558717 1102 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 AC104984.5-201ENST00000586878 94 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 AL160237.3-201ENST00000604114 1013 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 AP000787.2-201ENST00000604432 568 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 AC069545.1-201ENST00000605671 358 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 AC135507.1-201ENST00000607214 561 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 AC092953.2-201ENST00000608000 699 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 AC022306.3-201ENST00000619930 550 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 AC099654.9-201ENST00000637055 678 ntBASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TM9SF3Q9HD45 RNU6-1242P-201ENST00000391052 103 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 AL139039.1-201ENST00000401900 692 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 MIR1261-201ENST00000408659 82 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 RNU4-22P-201ENST00000411058 166 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 AC013410.2-201ENST00000422627 201 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 MTCO2P23-201ENST00000425216 680 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 UBE2V1P13-201ENST00000436983 439 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 ARPC3P5-201ENST00000448802 534 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 AL009048.1-201ENST00000450437 298 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 EIF4EP3-201ENST00000498782 656 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 MTND5P4-201ENST00000514978 288 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 RNU6-1225P-201ENST00000516336 65 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms