Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 RNU6-882P-201ENST00000391025 103 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.94□□□□□ -1.94
RNF41Q9H4P4 RABEPKP1-201ENST00000440529 1026 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.94□□□□□ -1.94
RNF41Q9H4P4 OR6K5P-201ENST00000447050 945 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AP000542.1-201ENST00000448473 371 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AC104563.1-201ENST00000476147 376 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 RPL23AP45-201ENST00000476406 468 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RNF41Q9H4P4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AC114781.4-201ENST00000513707 639 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AC026407.1-201ENST00000518369 204 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.94□□□□□ -1.94
RNF41Q9H4P4 RPL23AP84-201ENST00000571193 464 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 FAM60BP-201ENST00000578364 658 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 MIR4474-201ENST00000579189 78 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AP001029.3-201ENST00000588063 596 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AP000811.1-201ENST00000603803 651 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AC068313.1-201ENST00000604028 1008 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AL022099.1-201ENST00000604551 712 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AL031176.1-201ENST00000604554 466 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AC131159.1-201ENST00000621854 213 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AC120349.3-201ENST00000624377 529 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AC007671.2-201ENST00000637344 619 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 CRYM-AS1-204ENST00000637983 556 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AC092447.10-201ENST00000620607 1652 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RNF41Q9H4P4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RNF41Q9H4P4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
RNF41Q9H4P4 AC092447.7-201ENST00000422212 1621 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 AL136164.4-201ENST00000625013 2135 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RNF41Q9H4P4 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 FRG1BP-201ENST00000278882 761 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 RNU6-50P-201ENST00000362356 103 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RNF41Q9H4P4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.93□□□□□ -1.94
RNF41Q9H4P4 UBE2D3P1-201ENST00000436669 444 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.93□□□□□ -1.94
RNF41Q9H4P4 AC093392.2-201ENST00000450682 337 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 MTCO2P6-201ENST00000463134 685 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 LINC00888-204ENST00000487386 421 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 FAM172BP-201ENST00000487497 1089 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RNF41Q9H4P4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.93□□□□□ -1.94
RNF41Q9H4P4 RNU6-528P-201ENST00000516926 100 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 RPL7P20-201ENST00000520308 745 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.93□□□□□ -1.94
RNF41Q9H4P4 OR5BN1P-201ENST00000532955 829 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 SNRPGP16-201ENST00000533275 226 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
RNF41Q9H4P4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.93□□□□□ -1.94
RNF41Q9H4P4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.93□□□□□ -1.94
RNF41Q9H4P4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.93□□□□□ -1.94
RNF41Q9H4P4 MTCO3P24-201ENST00000572729 782 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 AL133393.1-201ENST00000603277 287 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 AC072039.2-201ENST00000608883 439 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 AC131902.3-201ENST00000611767 581 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 AL390240.1-201ENST00000612950 384 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.93□□□□□ -1.94
RNF41Q9H4P4 AC008147.4-201ENST00000617570 1204 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 AP000676.3-201ENST00000623299 569 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
RNF41Q9H4P4 AC009812.4-201ENST00000569134 1805 ntBASIC2.93□□□□□ -1.94
RNF41Q9H4P4 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.93□□□□□ -1.94
RNF41Q9H4P4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 RNU6-500P-201ENST00000362349 107 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 AL359511.1-201ENST00000402970 211 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 MIR320C1-201ENST00000408566 88 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 AL137014.1-201ENST00000420490 1226 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 USP9YP36-201ENST00000424581 829 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 SAR1AP4-201ENST00000429225 591 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 AC104332.2-201ENST00000429959 156 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 AC236972.1-201ENST00000433225 199 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 RPL36AP6-201ENST00000435770 321 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 RPS12P2-201ENST00000439728 269 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 TRIM60P18-201ENST00000441518 828 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 RPL39P40-201ENST00000445481 146 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 ATG12P2-201ENST00000456830 416 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 snoU13.8-201ENST00000458890 104 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 UBE2DNL-203ENST00000474922 222 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 AC068587.2-201ENST00000478386 781 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 MRPS33P3-201ENST00000513456 322 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms